Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1077 ATGCTATCTTTCATAAGCATCATTGCTTATATACTAGTCCCTTCTCTAAGAATTTCGACGGCAGTTGATTCCATTGTTGTATCCCATAGCATCTCGGATGGCATGACCTTAGTTTCTCAAGAAGGAACCTTTGAACTTGGATTCTTCAGTCCTGGAAGCTCCAACAAACGTTATTTGGGAATATGGTACAAGAAGATTCCAATTAGAACCGTTGTTTGGGTAGCGAACCGCCAAACCTCAATCAATGGCACTTCTGGTATCCTAATCCTAAACAATACAGGCAGTCTTGTCCTCAGCCAAAATGGCACAGTGGTCTGGTGTACAGCACCTCAAGAACATGCAAAGAAACCAGTGGCCCAGCTCCTTGATTCTGGCAATCTTGTGGTGCAAGATGAGGAAGATGCAAACCAAGAAGCCTATTTATGGCAAAGCTTTGATTACCCATCTGATACAATGTTGCCAGGTATGAAGATAGGGTGGGACCTCAGAGATGGTCTGAATAGACGTCTCACAGCATGGAAGAGCCCAGAAGATCCATCTCCAGGAGATTTTTCGTGGGGTATAGAGATCTATAATTATCCTGAATCAGTTATGTACAAGGGAATTGAGAAGTACTACAGACCTGGACCATGGAATGGCCTGTATCCAAGTGGCACACCAGAACTAAAGCCTAACTCTTTGTTTGATTTCAACTTTGTCTTTGATCAGGATGAGGTCTACTACACATACACTCTCAGAACTAACTCTTTGGTTTCAATATTAGTTATGAACCAGACCAGTTATGTTCGTCATCGCTATGTGTGGGTGGAAACAGATCAAAACTGGAAGATTTATGCATCACGTCCAGGAGATTACTGTGACACCTTTGGCCTATGTGGAGCAAACGGGAATTGTATCACCACTGATTCTCCAGTATGCCAATGTTTAAGAGGGTTCAGGCCTAAGTCACCAGCAACATGGATTTTAATGGACTGGTCTCAAGGGTGTGTTCGCAAGAAACCCTTAAGCTGCAAGTCCAAACGAAAGGATGGATTTCTCAAAGTGAGTGGCTTGAAACTTCCAGATACTTCACATACTTGGTTAGATCAGACTATTGGGCTAGAGAAATGCAGGACCAAGTGCTTAAATAACTGTTCTTGCATGGCCTATACAAATTCAGATATTAGAGGGAAAGGAAGTGGATGTGCCATATGGTTTGGTGACCTAATTGATATTAGACAAATGCCTGTAGGTGGGCAGGATCTATATATACGAATGGACGCTTCGGAATTAACTGAAGAGGCAGAACAAGGTCATAAGAAGTTAACAAAGACAATTATTGCCAGCATTGCCGTTGCAAGTTCGGGGATGCTCATACTCGTGTGCTTTTACATCCACAAAGTCTGCAAAAACAATAATGATGAAGTTAAAAATGTGCATGAGGATGAGAACAATGAAAAACATTCTGGAGATCTGGATCTCCCATTGCTTGACTTATCAACTATTGTCAATGCCACTGGTAACTTCTCTATTAACAACAAAATAGGAGAAGGTGGTTTTGGACTTGTATATCGGGGAAAATTGGTAAATGGGCAAGAAATTGCAGTGAAGAGGCTTTCAAAAAGTTCAGGACAAGGAATGACTGAACTCAAGAATGAAGTAAAACTGGTCGCAAAACTTCAGCACCGGAATCTTGTAAAGCTTCTAGGATGTTGCATTGAAGGAGAAGAACAAATGCTGGTCTATGAATACATGTCCAATAGCAGCCTAGACTCCTTCATTTTTGATGAAACAAAAGGCAAAGTTCTGGATTGGTCTAAACGCTACCACATTATTTGTGGCATTGCTCGAGGCCTTTTATATCTTCATCAAGACTCTAGATTGAGAATCGTTCATAGGGATCTCAAGGCAAGTAATGTGTTACTTGATGACATGTTGAACCCAAAGATATCTGATTTTGGAATGGCAAGAACTTTTGGTGGGGACCAAACTGAAGGAAGCACAAATCGAGTAGTAGGGACCTATGGCTACATGGCACCAGAATATGCTATTGATGGGGTATTTTCAATAAAATCTGATGTCTTCAGCTTTGGTATCTTGCTGCTGGAGATAATATCCGGAAAGAGAAATAGAGGATTTTATCATGCAAACCACAGCCAAAACCTTATCGGTCATGCATGGAGAAAATGGAAAGAAGGCAATGTTTTGGAACTGATTGACAAGAACATTGAGGGATCATGCATTGCATCAGAAGTGGTAAGATGTGTCCATATTAGCCTATTATGTGTGGAAGAGCATGCAGAGGATAGGCCAAGCATGTCCTCAGTGGTTCTAATGCTGCCAAGTGAAATGGAGTTGCCTAAGCCTAAACAACCAGGTTTCTATTTGACCAAGTTTTCAATGCAAGCAAATTCTTCCCAACCAGAATTTGGAACATCCAATGAGATAACCATTACCCAATTAATTGCTCGATGA 2454 0.4132 MLSFISIIAYILVPSLRISTAVDSIVVSHSISDGMTLVSQEGTFELGFFSPGSSNKRYLGIWYKKIPIRTVVWVANRQTSINGTSGILILNNTGSLVLSQNGTVVWCTAPQEHAKKPVAQLLDSGNLVVQDEEDANQEAYLWQSFDYPSDTMLPGMKIGWDLRDGLNRRLTAWKSPEDPSPGDFSWGIEIYNYPESVMYKGIEKYYRPGPWNGLYPSGTPELKPNSLFDFNFVFDQDEVYYTYTLRTNSLVSILVMNQTSYVRHRYVWVETDQNWKIYASRPGDYCDTFGLCGANGNCITTDSPVCQCLRGFRPKSPATWILMDWSQGCVRKKPLSCKSKRKDGFLKVSGLKLPDTSHTWLDQTIGLEKCRTKCLNNCSCMAYTNSDIRGKGSGCAIWFGDLIDIRQMPVGGQDLYIRMDASELTEEAEQGHKKLTKTIIASIAVASSGMLILVCFYIHKVCKNNNDEVKNVHEDENNEKHSGDLDLPLLDLSTIVNATGNFSINNKIGEGGFGLVYRGKLVNGQEIAVKRLSKSSGQGMTELKNEVKLVAKLQHRNLVKLLGCCIEGEEQMLVYEYMSNSSLDSFIFDETKGKVLDWSKRYHIICGIARGLLYLHQDSRLRIVHRDLKASNVLLDDMLNPKISDFGMARTFGGDQTEGSTNRVVGTYGYMAPEYAIDGVFSIKSDVFSFGILLLEIISGKRNRGFYHANHSQNLIGHAWRKWKEGNVLELIDKNIEGSCIASEVVRCVHISLLCVEEHAEDRPSMSSVVLMLPSEMELPKPKQPGFYLTKFSMQANSSQPEFGTSNEITITQLIAR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1077 817 Pfam Protein tyrosine and serine/threonine kinase 503 771 IPR001245 GO:0004672|GO:0006468
Prci6g1077 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Prci6g1077 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Prci6g1077 817 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Prci6g1077 817 SMART blect_4 28 148 IPR001480 -
Prci6g1077 817 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Prci6g1077 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 764 - -
Prci6g1077 817 CDD PAN_AP_plant 334 418 - -
Prci6g1077 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 179 IPR036426 -
Prci6g1077 817 Gene3D - 17 145 IPR036426 -
Prci6g1077 817 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Prci6g1077 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 419 - -
Prci6g1077 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Prci6g1077 817 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Prci6g1077 817 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1077 817 SUPERFAMILY Protein kinase-like (PK-like) 487 786 IPR011009 -
Prci6g1077 817 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Prci6g1077 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 145 - -
Prci6g1077 817 CDD STKc_IRAK 508 773 - -
Prci6g1077 817 CDD B_lectin 28 148 IPR001480 -
Prci6g1077 817 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1077 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 577 - -
Prci6g1077 817 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Prci6g1077 817 SMART ntp_6 340 419 IPR003609 -
Prci6g1077 817 Pfam PAN-like domain 337 405 IPR003609 -
Prci6g1077 817 Pfam Domain of unknown function (DUF3403) 776 817 IPR021820 GO:0004674
Prci6g1077 817 Pfam D-mannose binding lectin 70 174 IPR001480 -
Prci6g1077 817 Gene3D Transferase(Phosphotransferase) domain 1 578 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1077 Prci-Chr6 7544563 7548294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1077 435 787 Receptor kinase-like Gene Family AT4G23230 56.215 6.40e-130 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g1077 PK_Tyr_Ser-Thr 8.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1077 - - gmx:100778155 1091.26