Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1072 ATGATGAGCCACAGATTCAACCAACCGGAAGAATCCGAACCCGTACCGGACTCTCCGTCCTCCGGTGATGACATCAATACTGCAGCACCGTCTCCCAAGAAAAGGAAGGGGATAAAGAAGAGGGTGGTGGTCGTACCGATCGGTGACGTGGAGGGATCTAGGAGCAAAGGCGAGACGTATCCGCCGTCCGATTCTTGGGCTTGGAGAAAGTACGGCCAGAAGCCCATCAAAGGCTCTCCATATCCCAGGGGATATTACCGATGTAGTAGTTCGAAGGGTTGTCCCGCCAGGAAACAAGTAGAGAGAAGCCGTGTGGACCCCACGAAGCTCGTCGTCACCTACGCTCACGACCACAACCACTCCGTCCCGCCTGGTAAGCTTCACTCCGCCACCTCCTCCTCCTCCTCCTCTGCAGCCACATCAGCCGCTGCCGCTGACGTCAACGACGATGTACCTACCGAATTGGACTCTAAAGTCGAATCGGAAGAGAATCTCACCGTGTTCGCCAGCCATCCCGATCTAAAACTCGACAGCGACTCGGCTGTTCTGCTCGGCGACCACCATGGCCAATTCGGATGGTTCGATGACATGGCCTCCACAACGAGAGTCCTGGAAAGCCCGATCTTCGGCTGGGAGTTGGAGGATATGGCGTTGATGACGATGAGGGAGGATGAAGACGAGTCGCTGTTCGCGGATCTCGGCGAGCTGCCGGAATGTTCTGTGGTTTTCCGGAAAAGGAATATTCCGAGAACGAGCGCAATCCAGTGCGGTGGGATCACAGGGTAA 786 0.5598 MMSHRFNQPEESEPVPDSPSSGDDINTAAPSPKKRKGIKKRVVVVPIGDVEGSRSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVVTYAHDHNHSVPPGKLHSATSSSSSSAATSAAAADVNDDVPTELDSKVESEENLTVFASHPDLKLDSDSAVLLGDHHGQFGWFDDMASTTRVLESPIFGWELEDMALMTMREDEDESLFADLGELPECSVVFRKRNIPRTSAIQCGGITG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1072 261 MobiDBLite consensus disorder prediction 13 27 - -
Prci6g1072 261 ProSiteProfiles WRKY domain profile. 63 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g1072 261 MobiDBLite consensus disorder prediction 125 143 - -
Prci6g1072 261 Pfam WRKY DNA -binding domain 64 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci6g1072 261 SUPERFAMILY WRKY DNA-binding domain 58 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci6g1072 261 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 241 IPR044810 GO:0003700
Prci6g1072 261 Gene3D WRKY domain 50 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci6g1072 261 MobiDBLite consensus disorder prediction 118 150 - -
Prci6g1072 261 FunFam WRKY transcription factor 65 49 123 - -
Prci6g1072 261 MobiDBLite consensus disorder prediction 1 73 - -
Prci6g1072 261 SMART WRKY_cls 62 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1072 Prci-Chr6 7449907 7524264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1072 15 248 WRKY Transcription Factor Family AT3G58710 51.477 1.76e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci6g1072 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1072 - - gmx:100170680 317.39