Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1068 ATGATGTCAAAATCATACAATCTTCTTGATTTGGCTTCAGGGAATTTCCCAGCTATGGGTAAAGAATTTAAGGAACGGAGGCGGATGCCAAGGGCTATGAGTGTTCCTGGGATGATCTCAGAACTTGACGATACTCAGAGTGTTTCTTCTGATAATCCATCAGCTGCTTCGAATGATCGGATTATCATTGTGGCAAATCAGCTTCCTTTGAAAGGAAAGCGAAAAGAGGACAACAAAGGATGGAGTTTCAGTTGGAATGAGGACTCATTGCTTTTCCAGCTAAAGGATGGTTTTCCAGAAGATATGGAGGTTCTCTACGTCGGTTCACTGCGGGTTGATGTTGATCCTGCCGAACAGGATGATGTATCACAGTATTTGTTAGAAAAATTCAACTGTGTTCCTACTTTTCTGCCCCGTAATGTATTGGACAAATTTTATGATGGATTTTGCAAAAGGCAGTTGTGGCCTCTGTTTCATTACATGTTACCACTTTCAACTGATAGAAGCCAGCGCTTTGACCGCTCTTACTGGGAAGCCTATGTGTTGGCAAATAAACTTTTCTTTCAGAAGGTAGTTGAAATAATTAGCCCAGAGGATGATTATATTTGGATTCATGATTACCATTTGATGGTTCTGCCAACCTTTATAAGAAGGCGGTTTAACAGGGTTAAAATGGGATTTTTCCTTCATAGTCCCTTTCCATCATCAGAGATATATAGGACTCTTCCTGTGAGGGAAGAGATACTAAAAGCTTTACTTAACTCTGACATTATTGGTTTTCACACCTTTGATTATGCTCGTCATTTCCTTTCTTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGATTGGAATATTATGGAAGGACTATCAGTGTAAAGATTATGCCAGTTGGAGTTCACATGGGTCGAATTGAATCAGTTATGAAAATGACAGATGAGGAGAGTAAGGTTAGGGAACTCCAAAAAGAATACGAAGGAAAAACAGTGCTGCTTGGTGTTGATGATTTGGACATCTTTAAGGGAATTAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCTAAATGGCAAGGAAGAGCTGTGCTGATACAGATTGTAAATCCACCTAGGGGCAGAGGGATACATCTAGATGAAATCCTAGATGAGATACAAGAAAGCTGCAGCAGGATCAACAGAGCCTATGGGCGGCCTGGTTATCAGCCAATTGTTTTCATTGATAGAGCAGTTTCAATCACTGAAAAAGTTGCATATTACAGGATTGCTGAGTGTGTAGCTGTTACAGCTGTAAGGGATGGAATGAACCTGACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCTGAATCATGTTCTGATGTTAGTGGATTGAAGAAGAGTATGCTTGTAATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCAATCCGTGTCAACCCCTGGAATGTTGAAACAACTGCAGAGGCCATGAATGAGGCCATCTCGATGAATGATGAGGAGAAACAGTTGCGCCATGAAAAGCATTATCGGTATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGTTTCTTGCAAGATATGGAGAGGGCTTGCTCAGACCTTCTAAAGAAAAGATGTTGGGGAATAGGGCTCAGTTTTGGATTCAGAGTTGTGGCACTTGACCCCAATTTTAGAAAGCTCTCTATCGATCCTATGGTTTCAGCTTACAAGAGGGCAAGGAGCAGGGCCATTTTGTTGGATTATGATGGTACTGTAATGCCACAAAACTCCATCAGTAAGAGTCCTACTCAAGAGGTCATCTCCACCTTGAACACGCTATGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGAAGGGGGAGGGATAGCCTAAGCAAGTGGTTTACTCCCTGTGAAAAGCTTGGCGTTGCAGCAGAACATGGGTACTTCTTGAGATGGTCCCGAAGTGAAGAATGGGAAATTTGTGGCAAGAGCTCCGAATTTGCATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTGGTCTGGCAATATAGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAATTGCTAGATCACCTAGAGGGTGTTTTGGCCAATGAACCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTTGAAGTAAAACCCCAGGATGTGAGCAAAGGATTAGTTGCAGAAAAGATCTTCTCAACAATGGCTGAGAGAGGCACACAGGCTGACTTTGTGTTATGTGTTGGTGATGACAGATCAGACGAGGACATGTTTGAAATAATTAGTGGTGCAATGTCTAGAAATATTCTTGCTGCCAACTGTTCAGTATATGCTTGCACAGTTGGACAAAAACCTAGCAAAGCAAAGTATTATGTGGATGATACTACTGAAGTAATAAGCATGCTAGAATCCATGGCTGAAGAGTCAGAGGATTCAAGCCCTTGA 2541 0.4179 MMSKSYXNLLDLASGNFPAMGKEFKERRRMPRAMSVPGMISELDDTQSVSSDNPSAASNDRIIIVANQLPLKGKRKEDNKGWSFSWNEDSLLFQLKDGFPEDMEVLYVGSLRVDVDPAEQDDVSQYLLEKFNCVPTFLPRNVLDKFYDGFCKRQLWPLFHYMLPLSTDRSQRFDRSYWEAYVLANKLFFQKVVEIISPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISVKIMPVGVHMGRIESVMKMTDEESKVRELQKEYEGKTVLLGVDDLDIFKGINLKILAMEQMLRQHPKWQGRAVLIQIVNPPRGRGIHLDEILDEIQESCSRINRAYGRPGYQPIVFIDRAVSITEKVAYYRIAECVAVTAVRDGMNLTPYEYIACRQGISDSESCSDVSGLKKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMNDEEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACSDLLKKRCWGIGLSFGFRVVALDPNFRKLSIDPMVSAYKRARSRAILLDYDGTVMPQNSISKSPTQEVISTLNTLCADSKNVVFIVSGRGRDSLSKWFTPCEKLGVAAEHGYFLRWSRSEEWEICGKSSEFAWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKELLDHLEGVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSTMAERGTQADFVLCVGDDRSDEDMFEIISGAMSRNILAANCSVYACTVGQKPSKAKYYVDDTTEVISMLESMAEESEDSSP 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1068 847 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Prci6g1068 847 CDD GT20_TPS 61 544 IPR001830 GO:0003824|GO:0005992
Prci6g1068 847 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
Prci6g1068 847 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 847 - -
Prci6g1068 847 SUPERFAMILY HAD-like 591 838 IPR036412 -
Prci6g1068 847 Pfam Glycosyltransferase family 20 61 544 IPR001830 GO:0003824|GO:0005992
Prci6g1068 847 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
Prci6g1068 847 CDD HAD_TPP 592 831 - -
Prci6g1068 847 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Prci6g1068 847 Gene3D Glycogen Phosphorylase B; 53 314 - -
Prci6g1068 847 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 840 IPR001830 GO:0003824|GO:0005992
Prci6g1068 847 NCBIfam trehalose-phosphatase 588 839 IPR003337 GO:0003824|GO:0005992
Prci6g1068 847 FunFam Alpha,alpha-trehalose-phosphate synthase 315 528 - -
Prci6g1068 847 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Prci6g1068 847 Gene3D Glycogen Phosphorylase B; 315 528 - -
Prci6g1068 847 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 547 - -
Prci6g1068 847 Gene3D - 590 715 IPR023214 -
Prci6g1068 847 Gene3D - 716 846 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1068 Prci-Chr6 7429083 7433533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1068 1 846 Trehalose Biosynthesis Gene Families AT1G06410 75.472 0.0 1345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1068 K16055 - gmx:100800847 1494.18