Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1057 ATGCAATCTACAATCTCAGAGCTGCTAAGGAAGCTGCCACTCGCCCGATTTGCTCGTAGCAAGTATAGTTATGCATACGTGGCATCGGTTTACGAGCGCGTGTGGTCTCTCCGCTGCTTCCGAGACTATAAGTTTGCATTCCCTCGTGATATTTGTGCAAGTGCTTCCTGCCTGACCCAAAGTACACCTTACGTTTCTCTATTTTGTCTCCGAAAAGGGCTTTTAATTCTCCTCTCTCTTGCTAAAACCGAACCCCCGCTACAGAGAGAGAAAGAGAGGGAAGGTTCAGCCTTATCCAATTTAGGGTTTCAGATCATCATCGCCCAGTTTCTAACGCATCGGAACCCTAATTTAGGATCAGGTCTGAGCAATCTGGTTGGTAGGACCTTCAATCCAGGAGAGCTAAATTTCATGTCTGAATTAGACGCTCAGATTCCTACTGCCTTTGATCCGTTTGCTGAGGCAAATGCTGACGACTCAGGTGCTGGAGCAAAAGAGTATGTTCATATTCGCATACAGCAGCGGAATGGTAGAAAAAGCCTTACAACTGTCCAGGGATTGAAGAAAGAATTCAGCTACAACAAGATACTTAAAGACCTCAAGAAAGAGTTCTGCTGCAATGGCACTGTAGTCCAAGACCCAGAGCTCGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTATCTACCTTCCTTGTTCAGGCTGGTATCGTGAAGAAGGAGCATATCAAGATTCATGGTTTCTGA 753 0.4555 MQSTISELLRKLPLARFARSKYSYAYVASVYERVWSLRCFRDYKFAFPRDICASASCLTQSTPYVSLFCLRKGLLILLSLAKTEPPLQREKEREGSALSNLGFQIIIAQFLTHRNPNLGSGLSNLVGRTFNPGELNFMSELDAQIPTAFDPFAEANADDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1057 250 ProSiteProfiles Translation initiation factor SUI1 family profile. 168 238 IPR001950 GO:0003743|GO:0006413
Prci6g1057 250 SUPERFAMILY eIF1-like 136 250 IPR036877 GO:0003743|GO:0006413
Prci6g1057 250 FunFam Eukaryotic translation initiation factor SUI1 139 250 - -
Prci6g1057 250 Gene3D - 134 250 - -
Prci6g1057 250 Pfam Translation initiation factor SUI1 165 239 IPR001950 GO:0003743|GO:0006413
Prci6g1057 250 NCBIfam translation initiation factor SUI1 143 250 IPR005874 GO:0003743
Prci6g1057 250 CDD eIF1_SUI1 166 249 IPR005874 GO:0003743
Prci6g1057 250 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 143 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1057 Prci-Chr6 7360944 7363418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1057 138 250 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 1.25e-73 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1057 K03113 - pcin:129312453 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g1057 6 7360944 7363418 Prci6g1057 6 7360944 7363418 ECH