Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1054 ATGAAAGTTCCCTGGAAGGCCTCCTCGTCCTTCCAATTTCTATTGTTATTTCTCTTAGCTTGTTGTTGGAAATTTGAGGTGTGTTATGGACAAGCACAAGACGATTACAACAACGGCGGCGGCGGCGGCGGCGGAGAAAAGACGACAAAGAGACCGAAAGAGCTCGACAACTGCAACGGAATCTTCTTGACGTACAACTTCCAAGGACGAACGAAGGAGTTCCCTCACGTGAAGAACGTATCGAAGCAGGCTTGGGCGTTTGAGGCGGACGCGTCGTTGACGAATGTCGGGGACGAGGAACTGGTGGGGTGGAATATGTTCATAGGGTTCCAGCACAACGAGATTTTGGTGTCGGCGGACGGTGCTGTGCTGCTCGACGCCGGAGACTTCCCGGCGAACGTGAGCAATGGGACGACGTTGGCTGGAAGTTCCATGACGGACTTGCTGACGGCTATTGACACGGCCAACGATTTCGATCAAATGTCTGTTAATATTAAGATGAAAGGGACAATGTTTGGCGTCAAATCAGGAACCACCCCTATGCCCAAGACTATCAAACTGGTTAACGATGGCTTCAAGTGCCCCGCTGCAACTAGACAGCGGTCGAACATGTTTGTGTGCTGCAAGAAGGACCCGAAGGCAACGGTGCTGAATAAGAGGCAGACCAAGTTCCCTCCTCGCCGGTACGGCGACATAACCATCAGTTACGACGTGATTCAGGCGAACAAGAACAATTATTACGCTCAGATCACCATCGACGCGTGGCACCCACTCGCCCGCCTCGACCACTGGAACATCTCCTGGGAATGGCAGCGAGGCGAGTTCATCAGCTCCATGAAAGGCGTTTACTCCCACATGAGAGACATTTCCCAGTGCCTCTACGGCACCGCCAGTAAATTCTACGCCGACTTTAACTTCAACCAGCCCGGCGTCGAATGCGACAAAAAACCCACCCTCTCCGACCTCCCCGCCACCCTCAAGGAGGATGAGAAGCTCGGAAAACTCCCATTTTGCTGCCGCAACGGCACCGTCTTACCACCTTCACTGGACCCGAGCCAGGCTCGTTCCATCTTCCAGATCAACGTCATGAAGATGCCACCCGACAACGGCATGGCCACCTCCATCAAGCCTCCCTTGAAGTGGCGCATCGACGGCGTCGTTAATCCACAGTACAGATGCGGTCAGCCCATCCGGGTCTCCCCGCAAGAGTTCCCCGACCCGAGTGGACTTCAGTCCGTCACCCTCGCTGTTGCCAGCTGGCAGGTAGCCTGCAATATGACGAAGCCTAAGCCGAAGCAGAACCGGTGCTGCGTATCCTTTTCTGCCTACTACAACGACTCTGTAATCCCATGCAATACATGTGCATGTGGGTGTCCCGATACCAGAAAGTGCGATCCCGATGCCAGATCGTTGCTTCTTCCACCGGAAGCTCTTCTCGTGCCGTTCGTGAACAGAACGGCGAAGGCCAAAGCCTGGGCTGCTCTGAAGCACCATAGATTACCCAAAATGCTTCCTTGTGGAGATAACTGCCCGGTGAGCATAAACTGGCACATCAACTCAGACTCCGTTGCCGGGTGGACGGCGAGGATGACGATCTTCAACTGGGATGACTCCCCTTTCGAGGACTGGTTCGCGGCGGTCTCATTCAAGAGGTCTTACCCTAATTTCGAGAAGGTCTTCTCCTTCAACGGCACGAAAGTGGACAACATAAGCACAGTGATTTTCAACGGGTTAAAGGATATGAATTACTTGGTCGGAGAGACGAACGGGACGCATCCGTACGACCCGAGAGTGCCAGGAAAACAGCAATCGGTGATAACCTTTAACAAGAAGAACATTAAGAATTTTGATATCAGAAAAGATGGGTTTCCAACCAAAGTGTACTTCAACGGCGATGAGTGTGCTCTTCCCCCGTACGTGCCTCTTCAGAGCTTAGGGCATCGCCAAGCTTCTTCTTCCATAGTTGCAGTCATTTTGGTAGCGTTGGTGACATTCTTGACGACGACGACGACGAGTTCTGGGGAAAATAGCTATTACTTGTGA 2043 0.5272 MKVPWKASSSFQFLLLFLLACCWKFEVCYGQAQDDYNNGGGGGGGEKTTKRPKELDNCNGIFLTYNFQGRTKEFPHVKNVSKQAWAFEADASLTNVGDEELVGWNMFIGFQHNEILVSADGAVLLDAGDFPANVSNGTTLAGSSMTDLLTAIDTANDFDQMSVNIKMKGTMFGVKSGTTPMPKTIKLVNDGFKCPAATRQRSNMFVCCKKDPKATVLNKRQTKFPPRRYGDITISYDVIQANKNNYYAQITIDAWHPLARLDHWNISWEWQRGEFISSMKGVYSHMRDISQCLYGTASKFYADFNFNQPGVECDKKPTLSDLPATLKEDEKLGKLPFCCRNGTVLPPSLDPSQARSIFQINVMKMPPDNGMATSIKPPLKWRIDGVVNPQYRCGQPIRVSPQEFPDPSGLQSVTLAVASWQVACNMTKPKPKQNRCCVSFSAYYNDSVIPCNTCACGCPDTRKCDPDARSLLLPPEALLVPFVNRTAKAKAWAALKHHRLPKMLPCGDNCPVSINWHINSDSVAGWTARMTIFNWDDSPFEDWFAAVSFKRSYPNFEKVFSFNGTKVDNISTVIFNGLKDMNYLVGETNGTHPYDPRVPGKQQSVITFNKKNIKNFDIRKDGFPTKVYFNGDECALPPYVPLQSLGHRQASSSIVAVILVALVTFLTTTTTSSGENSYYL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1054 680 Pfam COBRA-like protein 246 427 IPR006918 GO:0010215|GO:0016020
Prci6g1054 680 PANTHER COBRA-LIKE PROTEIN 7 11 667 - -
Prci6g1054 680 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1054 Prci-Chr6 7350743 7353913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1054 1 665 COBRA Gene Family AT3G20580 54.627 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1054 - - gmx:100786691 877.856