Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1052 ATGGGTAAGAGTTACGAAGCAGTTCATGGAGTGTTGGCAGTGTTGTGTTTGGTGTTGTTGGTGGAGAAGAGTGGTGCGTATGAGTTCATAGTTGGCGGACAAAAGGGTTGGACTGTTCCAAGCGACCCAAATTTCAACCCTTACAATACTTGGGCTGAAAAGAGCCGTTTTCAGATAGGCGACTCCTTAGTGTTCAACTACAATTCTGGGCAAGACTCGGTGCTGGAAGTGAAGAGTGAAGACTACAGCAATTGCAACACCGATGCGCCAATTGCGAAGTACACGGACGGCCACACAGTGTACAAGTTCAATCACTCTGGCCATCACTTCTTCATCAGTGGAAATAGAGATAATTGCCTCAAGAATGAGAAGCTTGTCATAGTTGTGTTGGCTAATAGGAGCAGTAACAACACCCAACAAGCACCCACACCTGCTCCTTCTCCTTTAGCTTCTTCATCAACCTCGGCTCCATCAACACCACCTTCTTCTGCCACTTATCCTCCATCACCACCGCCTTCTTCCGCTGCCTCACCTCCGTCCCCACCACCGTCCACAGCTTCATCTCCTCCAGCACCATCACCGACCACTGGGACAACCCCCACGCCTGCTCCCGTTAGTGGGCCTCCATCTCATGCCAACGGTGCTTCTTCAATCTTTTGCACCTTTGCTGGAACTGCTGGAGCATTCGTCGTTTCAACTCTGATTTTATCTTTCTAA 717 0.4951 MGKSYEAVHGVLAVLCLVLLVEKSGAYEFIVGGQKGWTVPSDPNFNPYNTWAEKSRFQIGDSLVFNYNSGQDSVLEVKSEDYSNCNTDAPIAKYTDGHTVYKFNHSGHHFFISGNRDNCLKNEKLVIVVLANRSSNNTQQAPTPAPSPLASSSTSAPSTPPSSATYPPSPPPSSAASPPSPPPSTASSPPAPSPTTGTTPTPAPVSGPPSHANGASSIFCTFAGTAGAFVVSTLILSF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1052 238 Pfam Plastocyanin-like domain 37 121 IPR003245 GO:0009055
Prci6g1052 238 PANTHER BLUE COPPER PROTEIN 27 156 IPR039391 GO:0009055
Prci6g1052 238 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Prci6g1052 238 CDD OsENODL1_like 27 130 IPR041846 -
Prci6g1052 238 MobiDBLite consensus disorder prediction 136 211 - -
Prci6g1052 238 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Prci6g1052 238 MobiDBLite consensus disorder prediction 161 207 - -
Prci6g1052 238 MobiDBLite consensus disorder prediction 136 160 - -
Prci6g1052 238 Gene3D - 27 142 IPR008972 -
Prci6g1052 238 FunFam Early nodulin-like protein 9 27 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1052 Prci-Chr6 7341705 7342828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1052 12 187 Phytocyanin Superfamily AT3G20570 50.568 7.49e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1052 - - gmx:100792916 220.705