Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1050 ATGAGTGGAGAAATCCACATGCCCGCAGCGCTGGTGCCAGGTCGAGAGTGTTATTTTGCAAGATACTGTAAGAAGTTATCTGAGACGACGTGGGCCATCGTAGACGTGTCGTTGGAGAAGTATTTTCCTCATCCCTCCATCAATTTTCGAAGAAGGCCCTCAGGATGCTTCATTCAATTTATGCCCCAAGAAGGATTCTCTAAGATCACGTGGGTAGAGCATGTGGAAGCAGACTACAGAGATCTAAACTCCACATTCAAGGACCTAATCAAATCAAGTTTTGCTTTTGGCGCAACACGTTGGATTTCTGCTATGGTTCGCCAATTCGAATACTCTGAAATTCTCAAGGCAAAATACTGGCCTCCAGAAGATGCAGTGAAGGTGATCGGAGAAGGAGGAAGAAGGAGCATGTTGAAGCTGGGAGATAGGATGATAAGGACGTTCTGTAGTGAGATAAATGGTTCGAAACGAAACCAGTGGTTCCGATTACCAGGAGAACCATTTGATGATACAGAAGACGTGAGATTGGCCATTAGAGAGCACGCAATTGAAGCTGGAAAACCTTTGGCTACAACACTCGTCTTTGCAGCTTCGCAGTGGTTTCCGATCACTCCCCGCCTTTTGTTCGACTTCCTTCGTGATGCCGAATCCAGAACCGACTGGGATGTGCTTGCTCGAGGACTTTGTGTTCAAGAACTGTCGTACATTGTTAAGGGCAAAGATTCCGCTAATCGTGTTTCTCTCATGCAAGTCACAGATGAGCTAGACACTTATGTGATCAACTACATTCAAGAGAGCTACACAGACATAACTGGTTCGTATGTGGTTTATGCGCCAATAGACGAACCAGCAGTGACAGCCCTATTGGAAGGAGGAGACCCAGACATGGTTGGCATTTTACCTTCCGGTTTTTCTATTCTGCCGCAAGAGATCCCTAAGGACGACGGACCCCACAGTGGCGTCGCAAGCATTCTCACCGCTTCATTTAACATCGTTGACTATGGCTCTAATAAGTCCCATGTGCCTCCTCAATCATTAGCTGTCATTAAGAAGATTCTCAGAGAGACTTTCAAGGCTATCAAGAGTTTTGTGTTCAATGAGGACTCTGATGACGACTAA 1119 0.4602 MSGEIHMPAALVPGRECYFARYCKKLSETTWAIVDVSLEKYFPHPSINFRRRPSGCFIQFMPQEGFSKITWVEHVEADYRDLNSTFKDLIKSSFAFGATRWISAMVRQFEYSEILKAKYWPPEDAVKVIGEGGRRSMLKLGDRMIRTFCSEINGSKRNQWFRLPGEPFDDTEDVRLAIREHAIEAGKPLATTLVFAASQWFPITPRLLFDFLRDAESRTDWDVLARGLCVQELSYIVKGKDSANRVSLMQVTDELDTYVINYIQESYTDITGSYVVYAPIDEPAVTALLEGGDPDMVGILPSGFSILPQEIPKDDGPHSGVASILTASFNIVDYGSNKSHVPPQSLAVIKKILRETFKAIKSFVFNEDSDDD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1050 372 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 362 IPR042160 -
Prci6g1050 372 Pfam START domain 5 107 IPR002913 GO:0008289
Prci6g1050 372 SUPERFAMILY Bet v1-like 133 313 - -
Prci6g1050 372 ProSiteProfiles START domain profile. 1 114 IPR002913 GO:0008289
Prci6g1050 372 SUPERFAMILY Bet v1-like 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1050 Prci-Chr6 7313857 7316068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1050 1 362 Homeobox Transcription Factor Family AT1G05230 40.771 2.52e-93 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1050 K09338 - jre:108992281 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2252 7 35899194 35904655 Prci6g1050 6 7313857 7316068 CCT
Prci6g1050 6 7313857 7316068 Prci6g1050 6 7313857 7316068 ECH