Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1042 ATGAGCAGCAACAACAATAATTCTGCTCCATCATCTGGCTCTTGGCGAACTGGTGTTAGATTCTCTGGTTATCACATTCCCACCAACAGGGACTCTTTCGAGGTGCCTGCTTCCTCCCAATCTCCTTCTACGCGTACCACTCCGCGTCAGATGACACCAAGTCCATTGAATCCTTTGTGGTATATGGCAGATAGAAGGCAAGCAGGGCTCTACAGCATACCTGAAAGTGACTCTTACGAGGTGCCAGTGTTCTACCAAGCTTCTTCGAGACATGCCACTCCTGATGAAAGGACATCAAATGTAGTGAATCATCTTCAGTTTCTGGAAGACAGTTTTCCAGCACAACCGGACATTCTCAATGGAGATACAGGAAGGGGATTCAACCGCAGGCTCAGAGAAACTCACCAGGCATCAGTCCCGCCTCGAAGATCCACACGCCAATCAAACGCACAAGCTCCAACGGCACCAGAAAATCCCAGATGTAGAGCCTTGAGCAAGCTCAGGAAAGAAATCTACGAGCCCAATATTCCAACTTCAAAGATGCTAGCAAAGAAATTGAGCTTCTACTACAGAGACAATAAAGGTGTGAATGCTTTGAAGGAGATGGAGAACAAGCAAAAGAACGAAGACAGAAAGAGTTGCGCGGTGTGCCTGGAGGATTTCGTGCCCAAACAGGAGGTAATGGTGACGCCGTGCAAACACATGTTTCACGAGGATTGTATAATGCCATGGCTGAGAAGCCAAGGTCAGTGTCCGATATGTAGATTCGTGATCTGCGAGAAAGAGAGGGAGAACGATGTTGGCACCAGTTACCTAATTGCAGGGGATCTTCTGTCTATTGTGAGGGCCATGGAAGAAGCCTTCCGATTGGATCCCGAGACGCTCTGA 888 0.482 MSSNNNNSAPSSGSWRTGVRFSGYHIPTNRDSFEVPASSQSPSTRTTPRQMTPSPLNPLWYMADRRQAGLYSIPESDSYEVPVFYQASSRHATPDERTSNVVNHLQFLEDSFPAQPDILNGDTGRGFNRRLRETHQASVPPRRSTRQSNAQAPTAPENPRCRALSKLRKEIYEPNIPTSKMLAKKLSFYYRDNKGVNALKEMENKQKNEDRKSCAVCLEDFVPKQEVMVTPCKHMFHEDCIMPWLRSQGQCPICRFVICEKERENDVGTSYLIAGDLLSIVRAMEEAFRLDPETL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1042 295 SUPERFAMILY RING/U-box 213 262 - -
Prci6g1042 295 MobiDBLite consensus disorder prediction 140 155 - -
Prci6g1042 295 MobiDBLite consensus disorder prediction 134 160 - -
Prci6g1042 295 MobiDBLite consensus disorder prediction 32 54 - -
Prci6g1042 295 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Prci6g1042 295 FunFam RING/U-box superfamily protein 198 271 - -
Prci6g1042 295 Pfam Ring finger domain 213 255 IPR001841 -
Prci6g1042 295 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 94 256 - -
Prci6g1042 295 MobiDBLite consensus disorder prediction 1 18 - -
Prci6g1042 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 271 IPR013083 -
Prci6g1042 295 SMART ring_2 214 254 IPR001841 -
Prci6g1042 295 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1042 Prci-Chr6 7268955 7271896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1042 143 288 C3H Transcription Factor Family AT3G58720 44.654 1.12e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1042 - - pcin:129314308 604.364