Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1028 ATGATGATTATTATTTCAAAGGCTAGCTTCTGCATTCTGTTGGTTCTTCTCACGACATCAGGTTGTTCAAAAGATTCGGAGGAAACACAGGAAGACTTCCTTTGCCAGCTGCTTGATCCCACGTCTGGATTGTTGGACGAGGATACGGTACAGCAATTACGGTCCACTTGCTCTGTGGATTTGATTCAATTGAAGGAAGAAGTTAGAAATCATGACTTATGCTTTCCACCTGAATTATCATCCAGTTGCACCAATGATATTGGTTCAGAGACTCAATTTTTGGCACAAGAAAACATTCAAAAATTGATTAATGCTTGCCATCCTCAGTTGAAGCAAATCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCACTCCGAAGTGTATCCGGTGATGAAGATGATGATTCCAGATCCAATGATCCTAGAAGAAATCTGGGTCTGGGCTTGTCTCAACATGTATCAAAACCACCAAGTCCTGGCCCTGGCCATGCAGTTAAATCATATATCCACACTCAAGAACCACAATCTCCACTGCCAAAGAAATCTGGATCTTTAACTTCAAAAAGGGGACCTCCCGCACCGGTGATGTATGCTAAAGATAAATCTAAATCCGAAGGACATGCAGATAAGAAAAAATATAAAAAGAAGAAAAAGAAAAGTGATAATAACATGGTTATAATTGCTGTTGCCGCAGCTGGCGCATCAGTGACGCTACTAGTGGTACTGCTCTGTGTTTTGTGTTGCTGTTGTGCTGGCAAAAGCCAAGTTAGAAAATATGACGAGAGGCCCCTTCTCAGTGTGAGCAGGAGTGACTACTCTTCTACAGGTTCTTCTTCTCCCCATTTTGCTTCTGGAAATTCAGAAACTCCTTCACCAGCATTTGCTGGTACAGATGCTGCTGCCAGACCATCATTTGACCTGAAGCCTCCTCCTGGCAGGGTGGGAATCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCTCCTTCCCCCTGAGCTTCCTTCTGGTAATTCCAATACTCCTCCTCCTCCTCCTCCTCCAGCACCTCCACAGCCACCCAAAACTGCTGCTGGACCTCCTCCTCCACCACCTCCAGCACTACCTGGTGCCAGAAAAGGTGCTGGTGCACCACCACCACCACCTCCTCAGAGTGGTAAAGGTCCTCCTCGACCACCTCCACCAATTGGTGGTGTAAAGGGTCCACGCCCTTTAGTTATACAGAAGAAGTCAAGAGCCGCAGAATCTGGAGGAGCTGCTGATTCAGAAGGTGGTGCTACTAAAGCCAAATTAAAACCCTTTTTTTGGGATAAGGTTCAAGCCAACTCAGATCAAACAATGGTTTGGAATCAGCTTAAAGCAGGATCATTCCAGGTTGACGAAGAAATGATGGAGACACTTTTTGGCTATACCAATACAGATAAAAGCAAAAGTCAAGCCAAGAAAAGATCTGCCTCCATGGAACAGGCACCTCAGTTTATCCAGATCATTGACTCAAAGAAAGCACAAAATCTGTCAATTTTATTGCGAGCTTTGAATGTGACCATGGAAGAAGTTTGTGATGCACTTCGTGAAGGAAATGAGCTTCCCCCAGAATTTATCCAATCCTTGCTCAAGATGTCACCCACATCTGAGGAGGAACTTAAGCTTAGACTTTTCAGTGGCAACCTGTCTCAACTTGGGCCTGCTGACCGGTTCCTAAAGGCCCTTGTTGATATTCCATTTGCATTTAAACGACTGGAATCACTTCTTTTTATGGGTACTCTTAAAGAGGAGCTCACCTTCACCAGGGATGCCTTTGCTGTTTTACAGGTTGCTAGCGGAGAACTAAAAGGAAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACGCTCCTTAAATTGTCTGATGTTAAAGGAGTAGATGGCAAAACTACACTCTTACACTTTGTTGTTAAAGAGATAATCCGATCTGAGGGCATACGAGCAGTTCGTGGGGCCAAAGAGAGCAAGAGTTTCTCTAGCATTAAAACAGATGACCTGTTCGAGGAAGTCTCCACTGAATCTGAAGAGCGGTATCGTGAACTCGGTCTTCAGGTGGTATCACGATTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCAGCTTTAGATGCTGATGCTTTAACAGGAACCACTGCAAGACTTGGGTATTCTCTCTTGAAAATCAAAGAGTTCTACAACAGAGACCTTAAGGAGTTAGATGAACAAAGTAGAGGAGGGTTTTATCAGACAGTGGAGAGTTTTGTGGAGAATGCTGAAGGTACTATAATGAGTCTGCTGGAAGAAGAGAAGAGGATCACAGCTTTGGTGAAGAGTACAGGTGACTACTTCCATGGGAACAGTGGGAGGGATGAAGGGTTGCGACTGTTTGTGATCGTACGAGACTTCTTGGTCATACTGGATAAGGTATGCAAGGAGGTTGGAGTTGAACAGAAGAAGACGGCCGCCGCCGCCGCCGCGGGGATGGCTCCTAAACAAGAGACTTCTAAGGCTCCTCCTTCTGACACTCGCCCACCACCGAAGAATAAGCAGCTTCTTTCAGGACTATCAGATAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCATAG 2679 0.4505 MMIIISKASFCILLVLLTTSGCSKDSEETQEDFLCQLLDPTSGLLDEDTVQQLRSTCSVDLIQLKEEVRNHDLCFPPELSSSCTNDIGSETQFLAQENIQKLINACHPQLKQIFLHCLRKNNLPLRSVSGDEDDDSRSNDPRRNLGLGLSQHVSKPPSPGPGHAVKSYIHTQEPQSPLPKKSGSLTSKRGPPAPVMYAKDKSKSEGHADKKKYKKKKKKSDNNMVIIAVAAAGASVTLLVVLLCVLCCCCAGKSQVRKYDERPLLSVSRSDYSSTGSSSPHFASGNSETPSPAFAGTDAAARPSFDLKPPPGRVGISPLKPPPGRPDLLPPELPSGNSNTPPPPPPPAPPQPPKTAAGPPPPPPPALPGARKGAGAPPPPPPQSGKGPPRPPPPIGGVKGPRPLVIQKKSRAAESGGAADSEGGATKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQVDEEMMETLFGYTNTDKSKSQAKKRSASMEQAPQFIQIIDSKKAQNLSILLRALNVTMEEVCDALREGNELPPEFIQSLLKMSPTSEEELKLRLFSGNLSQLGPADRFLKALVDIPFAFKRLESLLFMGTLKEELTFTRDAFAVLQVASGELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVKEIIRSEGIRAVRGAKESKSFSSIKTDDLFEEVSTESEERYRELGLQVVSRLSSELENVKKAAALDADALTGTTARLGYSLLKIKEFYNRDLKELDEQSRGGFYQTVESFVENAEGTIMSLLEEEKRITALVKSTGDYFHGNSGRDEGLRLFVIVRDFLVILDKVCKEVGVEQKKTAAAAAAGMAPKQETSKAPPSDTRPPPKNKQLLSGLSDRRMDDFSSDDESP 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1028 892 MobiDBLite consensus disorder prediction 268 293 - -
Prci6g1028 892 Gene3D Formin, FH2 domain 426 863 IPR042201 -
Prci6g1028 892 ProSiteProfiles Formin homology-2 (FH2) domain profile. 420 854 IPR015425 -
Prci6g1028 892 SMART it6_source 420 843 IPR015425 -
Prci6g1028 892 MobiDBLite consensus disorder prediction 169 183 - -
Prci6g1028 892 MobiDBLite consensus disorder prediction 843 892 - -
Prci6g1028 892 MobiDBLite consensus disorder prediction 268 402 - -
Prci6g1028 892 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Prci6g1028 892 MobiDBLite consensus disorder prediction 126 141 - -
Prci6g1028 892 PANTHER FORMIN-RELATED 141 873 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Prci6g1028 892 SUPERFAMILY Formin homology 2 domain (FH2 domain) 433 843 - -
Prci6g1028 892 MobiDBLite consensus disorder prediction 876 892 - -
Prci6g1028 892 Pfam Formin Homology 2 Domain 425 827 IPR015425 -
Prci6g1028 892 MobiDBLite consensus disorder prediction 125 219 - -
Prci6g1028 892 MobiDBLite consensus disorder prediction 314 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1028 Prci-Chr6 7171722 7179270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1028 397 883 FH2 protein (formin) Gene Family AT5G54650 63.008 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1028 - - pcin:129312728 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2000 7 34277179 34283055 Prci6g1028 6 7171722 7179270 CCT
Prci6g1028 6 7171722 7179270 Prci6g1028 6 7171722 7179270 ECH