Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1025 ATGAAAGACGAATCAATTGGACTGATAATTGGAATTTCCATAGGTGTGGTTATTGGAGTGATTTTGGCTATTTCTGCACTGTTCTGTCTCAGATACCATAGGAAGCGTTCACTGATAGGCAATAGCAGTTCCCGGAGGGCAGCCACCATACCCATCCGTGCAAATGGTGCTGATTCTTGTACTATTCTATCAGACTCGACGCTAGGTCCAGAATCTCCTGTAAAGTCTGGGAGGAGCGGCACTGCCTTCTGGGTTGATGGATTTAGGAGGGGTAGCATGGTTTCAGCATCTGGAATACCTGAGTATTCATACAAGGATCTGCAGAAGGCAACATATAATTTCACTACACTCATAGGACATGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGGGAGACAGTTGCGGTTAAGGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTCCATACAGAGGTCATGTTATTGGGAAGGTTACATCATCGAAACTTGGTGAATTTAATCGGATACTGTGCAGAAAAAGGTCAGCATATGCTCATTTATGTCTACATGAGTAAGGGCAGCTTGGCTTCACACTTGTATAGTGAAGAGAACAAGGCACTGAGCTGGGATTTGAGGGTTCATATAGCCTTGGATGTGGCAAGAGGCTTGGAATATCTTCATGATGGAGCAGTTCCTCCTGTGATCCATCGAGATATCAAATCTTCGAATATTCTATTGGACCATTCCATGCGAGCTCGGGTTTCAGATTTTGGGTTATCAAGAGAAGAGATGGTGGATAAGCATGCAGCTATTCGGGGAACCTTTGGGTATCTTGACCCTGAGTATATCTCTTCTGGCACTTTCACTAAAAAAAGTGACGTGTATAGCTTTGGGGTGTTGCTTTTTGAACTCATTGCCGGCCGAAATCCTCAACAGGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAGCACTGAGGGTAAAGCTGGTTGGGAGGAAATTGCTGATGCTCGCCTTGAAGGAAAGTTTGATGTTCAAGAGCTGAATGAAGTTGCAGCCCTTGCATACAAGTGCGTGAACCGTGCCCCGAGGAAACGTCCCTCGATGAGGGACATAGTGCAAGTCCTGACACGGATTCTGAAGTCAAGACGCCCCAGGAATCACCACAGGAAGGCCTTGTCTGCAACTGCAGATGAAGTGGCTTCCGTTGATGGTGATCCGCCAGAAACAAAGATTACTGTAACTGAGCACAGGCGAGAAGAGTCCATGGATAGTACAGTTGATGCCTATGAAGTATAG 1293 0.4548 MKDESIGLIIGISIGVVIGVILAISALFCLRYHRKRSLIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVKSGRSGTAFWVDGFRRGSMVSASGIPEYSYKDLQKATYNFTTLIGHGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLIGYCAEKGQHMLIYVYMSKGSLASHLYSEENKALSWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDHSMRARVSDFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMSTEGKAGWEEIADARLEGKFDVQELNEVAALAYKCVNRAPRKRPSMRDIVQVLTRILKSRRPRNHHRKALSATADEVASVDGDPPETKITVTEHRREESMDSTVDAYEV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1025 430 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Prci6g1025 430 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Prci6g1025 430 MobiDBLite consensus disorder prediction 385 430 - -
Prci6g1025 430 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1025 430 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1025 430 CDD STKc_IRAK 118 377 - -
Prci6g1025 430 Gene3D Phosphorylase Kinase; domain 1 88 187 - -
Prci6g1025 430 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 396 - -
Prci6g1025 430 MobiDBLite consensus disorder prediction 408 424 - -
Prci6g1025 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Prci6g1025 430 Gene3D Transferase(Phosphotransferase) domain 1 188 400 - -
Prci6g1025 430 SUPERFAMILY Protein kinase-like (PK-like) 101 387 IPR011009 -
Prci6g1025 430 PANTHER OS01G0750732 PROTEIN 5 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1025 Prci-Chr6 7137415 7142874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1025 24 374 Glycoside Hydrolase AT3G07070 40.270 9.58e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Prci6g1025 PK_Tyr_Ser-Thr 1.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1025 - - gmx:100799586 726.087