Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g1006 ATGGAGACGGATGATGAGTATAAGAGGAAGGCGGAGATCGCTTTGGTAGTCATTGTGGTGCTTGCTTCCCTTGCCGTGGTTGCTTTGCTTGTTGCACTCAGCTACTATTGCTACATCCGCAACAAAGTCGCCCAGCGCCGCAAGAACCGGAAAGATTTTGACAATAGCGAGAAAAGTGAATTTGCAAATCTACAAGTTGTTGCTGAAAAAGGACTTCAGGTGTTCACTTTTAAGCAGTTGCATTCTGCAACTGGTGGCTTCAGCAAGTCAAATGTGATTGGTCATGGTGGATTTGGATTTGTTTACCGGGGAGTACTCAATGATGGCCGGAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAGGGAGAAGAAGAATTTAAAGTAGAGGTTGAATTGCTAAGTCGGTTGCGTTCTCCATATTTGCTGGCATTACTCGGGTACTGCTCGGATAATAATCATAAACTGCTGGTGTACGAGTTCATGGCAAATGGTGGTCTGCAGGAACATCTTTATCCTGTCAGCAACCCTATTGTTATGCCCATGAAGTTGGATTGGGAAACCCGTTTACGAATAGCACTTGAAGCTGCCAAGGGTTTGGAATATCTTCATGAAGATGTCAGCCCCCCGGTGATTCACAGAGATTTTAAGAGCAGCAACATTCTTCTGGACAAAAAGTTTCATGCAAAAGTTTCTGATTTTGGATTGGCTAAGCTTGGATCTGATAAAGTTGGTGGACATGTTTCCACTCGAGTCTTGGGAACGCAGGGATATGTTGCTCCTGAATATGCACTAACAGGGCATCTAACCACAAAATCAGATGTATACAGTTATGGTGTTGTTCTTTTGGAGCTGCTCACTGGCCGAGTACCGGTTGACAAGAAGAGACCACCAGGAGAAGTTGCTCTTGTTACCTGGGCTCTGCCCCTTCTGACTGATAGAGAAAAGGTGGCAACGATTATGGATTCTGCATTGGAGGGTCAGTACTCCATGAAAGAGGTTGTCCAAGTAGCTGCCATTGCTGCAATGTGTGTGCAATCAGAGGCCGATTACCGGCCGCTCATGGCAGACGTTGTCCAGTCATTAGTTCCGCTTGTGAAGACTCACCGATCGACCTCAAAGGTCGGAAGCTGCTCTAGTTACCATGCGAATAAGTTGTCGCCTGCTCAAGATTCAGCAAGAGCTAATGTATGA 1197 0.4578 METDDEYKRKAEIALVVIVVLASLAVVALLVALSYYCYIRNKVAQRRKNRKDFDNSEKSEFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGFVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLSRLRSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVSNPIVMPMKLDWETRLRIALEAAKGLEYLHEDVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDKKRPPGEVALVTWALPLLTDREKVATIMDSALEGQYSMKEVVQVAAIAAMCVQSEADYRPLMADVVQSLVPLVKTHRSTSKVGSCSSYHANKLSPAQDSARANV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g1006 398 Pfam Protein kinase domain 88 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1006 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 380 - -
Prci6g1006 398 SUPERFAMILY Protein kinase-like (PK-like) 69 363 IPR011009 -
Prci6g1006 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Prci6g1006 398 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Prci6g1006 398 FunFam Serine/threonine-protein kinase PBS1 54 162 - -
Prci6g1006 398 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g1006 398 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Prci6g1006 398 Gene3D Phosphorylase Kinase; domain 1 46 162 - -
Prci6g1006 398 CDD STKc_IRAK 93 366 - -
Prci6g1006 398 PANTHER OS07G0668900 PROTEIN 54 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g1006 Prci-Chr6 6953385 6957400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g1006 1 389 Receptor kinase-like Gene Family AT3G58690 77.892 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Prci6g1006 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g1006 - - qsa:O6P43_028923 647.506