Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0993 ATGAATCAGTTATCATCATCATCATCAGATTGCTTTAATTCGTTACCAAACATGGCTGAGAGGGAGAGAATTTGCATATCAGACGAAAACCAGAGCGAAGAAAGTAACAGCAACAACATCATCATCAGAGAGAAACCCCCTTGTTCGTTTTCTACTTCTCTGTGTATTCAAAAGAGTTCGTTGTTTAATCTGAACGAAGAAGCTGTGGACGATCTTGGTGGTGGAGGATCGTCCTCGTCCTCGTCATCAGGAGAAGGTAATGTGAGTAGCAGCAACAAGTCATCAAGTTCAGAAGTGAAAGAGAGAACAAATAGTGTGAGGCAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCCTTTGTTCGTGCTGTTGAAAGGCTTGGTGGACAGGAAAAAGCAACGCCCAAGTTAGTTTTACAGTTGATGAATGTGAGAGGGCTTAGCATTGCTCATGTAAAGAGCCATTTACAGATGTATCGAAGCAAGAAACTTGACGAGTCTGGCCAAGTTTTATCCCAAAATAGGGCAACATTGCAAGGACGAAGAGATCGCATTTTGGATGTGTACGAGAGATTTAGGGCTCGAGGAGGACACCTTGGGATTGATAACTATCTCCCAACATTACCTCTCGTTATGAAGCCGACATTCGACTTTAAATCTCATGGCTCTTCAAGATTCGAAGCAGGTGAGACAAGACCAAGTTCATGGGTAGGGTGGAGCAACGCGTTAGGGTTGTGTGAGGTTGGCAGAGACAGAAGGATGATTCAGAGGAAGAAGATTGGAGGGTGTGGTAACCTATTATTTGAGGTTAACGATGCTAATAATATTAGAATAAGAAATGGACCTCTTACTCTTAGGCCAAACCCATTCCTCGAAGACAAGAAATGGCCTCCTCGTGAAACACCTGACAAACCTTATTGGGATGACAAACGTTGTCCATGGAGCCCCACTAAATGCTTTTTTATCAAAGCTAATCTTCATCATGAACCTATTTCCTTCACCCACCTCGACTTTGATGCTCAGGTTCATCATGACGTTCAAAAAGATGTGACGCCATGTTTCAGAAATCAGAATCACTTATCAGAAACAGGTGAAGTTAAAGGCCAATTAGAGAGCTTGAAGGAGAGGAAAGAAGCACCCAGTTTGCTTAAGCCATGTTTAGCCCAAGATTCTGCAATTAATGTTGCAGAAGTGAACAATCCTGATCTTCCAGGTAATGATGGAGCAATCAATACGATGTTGTCTCTTTCATTGTAA 1278 0.4257 MNQLSSSSSDCFNSLPNMAERERICISDENQSEESNSNNIIIREKPPCSFSTSLCIQKSSLFNLNEEAVDDLGGGGSSSSSSSGEGNVSSSNKSSSSEVKERTNSVRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRATLQGRRDRILDVYERFRARGGHLGIDNYLPTLPLVMKPTFDFKSHGSSRFEAGETRPSSWVGWSNALGLCEVGRDRRMIQRKKIGGCGNLLFEVNDANNIRIRNGPLTLRPNPFLEDKKWPPRETPDKPYWDDKRCPWSPTKCFFIKANLHHEPISFTHLDFDAQVHHDVQKDVTPCFRNQNHLSETGEVKGQLESLKERKEAPSLLKPCLAQDSAINVAEVNNPDLPGNDGAINTMLSLSL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0993 425 MobiDBLite consensus disorder prediction 74 103 - -
Prci6g0993 425 Pfam Myb-like DNA-binding domain 117 167 IPR001005 -
Prci6g0993 425 SUPERFAMILY Homeodomain-like 113 169 IPR009057 -
Prci6g0993 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 171 IPR017930 -
Prci6g0993 425 FunFam Myb family transcription factor 113 171 - -
Prci6g0993 425 NCBIfam myb-like DNA-binding domain, SHAQKYF class 115 170 IPR006447 GO:0003677
Prci6g0993 425 MobiDBLite consensus disorder prediction 72 107 - -
Prci6g0993 425 Gene3D - 114 171 - -
Prci6g0993 425 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 92 188 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0993 Prci-Chr6 6902629 6906434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0993 103 197 G2-like Transcription Factor Family AT2G42660 65.263 9.44e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci6g0993 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0993 - - pcin:129314274 812.372