Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0992 ATGGCTGAGAGGGAGAGAATTTGCATATCAGACGAAAACCAGAGCGAAGAAAGTAACAGCAACAACATCATCATCAGAGAGAAACCCCCTTGTTCGTTTTCTACTTCTCTGTGTATTCAAAAGAGTTCGTTGTTTAATCTGAACGAAGAAGCTGTGGACGATCTTGGTGGTGGAGGATCGTCCTCGTCCTCGTCATCAGGAGAAGGTAATGTGAGTAGCAGCAACAAGTCATCAAGTTCAGAAGTGAAAGAGAGAACAAATAGTGTGAGGCAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCCTTTGTTCGTGCTGTTGAAAGGCTTGGTGGACAGGAAAAAGCAACGCCCAAGTTAGTTTTACAGTTGATGAATGTGAGAGGGCTTAGCATTGCTCATGTAAAGAGCCATTTACAGATGTATCGAAGCAAGAAACTTGACGAGTCTGGCCAAGTTTTATCCCAAAATAGGGCAACATTGCAAGGACGAAGAGATCGCATTTTGGATGTGTACGAGAGATTTAGGGCTCGAGGAGGACACCTTGGGATTGATAACTATCTCCCAACATTACCTCTCGTTATGAAGCCGACATTCGACTTTAAATCTCATGGCTCTTCAAGATTCGAAGCAGGTGAGACAAGACCAAGTTCATGGGTAGGGTGGAGCAACGCGTTAGGGTTGTGTGAGGTTGGCAGAGACAGAAGGATGATTCAGAGGAAGAAGATTGGAGGGTGTGGTAACCTATTATTTGAGGTTAACGATGCTAATAATATTAGAATAAGAAATGGACCTCTTACTCTTAGGCCAAACCCATTCCTCGAAGACAAGAAATGGCCTCCTCGTGAAACACCTGACAAACCTTATTGGGATGACAAACGTTGTCCATGGAGCCCCACTAAATGCTTTTTTATCAAAGCTAATCTTCATCATGAACCTATTTCCTTCACCCACCTCGACTTTGATGCTCAGGTTCATCATGACGTTCAAAAAGATGTGACGCCATGTTTCAGAAATCAGAATCACTTATCAGAAACAGGTGAAGTTAAAGGCCAATTAGAGAGCTTGAAGGAGAGGAAAGAAGCACCCAGTTTGCTTAAGCCATGTTTAGCCCAAGATTCTGCAATTAATGTTGCAGAAGTGAACAATCCTGATCTTCCAGGTAATGATGGAGCAATCAATACGATGTTGTCTCTTTCATTGTAA 1227 0.4303 MAERERICISDENQSEESNSNNIIIREKPPCSFSTSLCIQKSSLFNLNEEAVDDLGGGGSSSSSSSGEGNVSSSNKSSSSEVKERTNSVRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRATLQGRRDRILDVYERFRARGGHLGIDNYLPTLPLVMKPTFDFKSHGSSRFEAGETRPSSWVGWSNALGLCEVGRDRRMIQRKKIGGCGNLLFEVNDANNIRIRNGPLTLRPNPFLEDKKWPPRETPDKPYWDDKRCPWSPTKCFFIKANLHHEPISFTHLDFDAQVHHDVQKDVTPCFRNQNHLSETGEVKGQLESLKERKEAPSLLKPCLAQDSAINVAEVNNPDLPGNDGAINTMLSLSL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0992 408 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 153 IPR006447 GO:0003677
Prci6g0992 408 SUPERFAMILY Homeodomain-like 96 152 IPR009057 -
Prci6g0992 408 MobiDBLite consensus disorder prediction 55 90 - -
Prci6g0992 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 154 IPR017930 -
Prci6g0992 408 FunFam Myb family transcription factor 96 154 - -
Prci6g0992 408 Pfam Myb-like DNA-binding domain 100 150 IPR001005 -
Prci6g0992 408 MobiDBLite consensus disorder prediction 57 86 - -
Prci6g0992 408 Gene3D - 97 154 - -
Prci6g0992 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 75 172 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0992 Prci-Chr6 6902629 6906434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0992 86 180 G2-like Transcription Factor Family AT2G42660 65.263 7.20e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci6g0992 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0992 - - pcin:129314274 781.556