Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0986 ATGCTCAAATGCTTGGATCTTCTGGAGGACATGGATGAGAGACGAAATGATGCAGGGCCTGCAGAACAAGGGCCATCAAACTCTTCATGGTGGCCCTCAGACTTTGTTGAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGAGCTTAAATAATAAAGGATCACCTAGACATTTTGAGCAAGATGTTTTGTCACCTTATAAAGCATCACAAATCTTCTGGCGCACTGGAATGCTTGCAGAACCAATACCAAATGGTTTTTATTCGGTCATTTCCGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACCATGGATGAGATTCATGCTTTGGGTGGAGAGGGTCTAAAGGCTGATGTCATTTTGGTAGACGCAGAGAAAGATAAAAAATTATCTATGTTGAAGCAATTGATCGTGGCCCTAGCTAAAGGATTGAACTCAAATCCAGCTGCGATAATAAAAAAGATAGCTGGACTAGTTTCTGATTTTTATAAGCGATCAAATGTGGAAAGTCCAGCAAAAGCTGTAGTAGAGGAAACCTCCCACATGTTTGAGAATCGAGGTGCCCAGATACTCGGACAAATAAAGAATGGCTCATGCTGTCCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACCGTAGGTCTTGAAAGTAGGCTCATGGTGGGTTTGCCAAACGATGGGGTTGTTGAATGTGTGGACTCATACAAGCATATGTCAGTTATTGTTGTACTAAATTCTGTGGAACTGCTCGTTGATCTCATGAGATGCCCTGGTCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCGAACAGTCCTTTATATGGGGTTTCAGAGAAAGTGGATCCTGACAGCGCTGAAAAGGAGGAGAACCTCCCATTCCAGAGGAGATTTGATACTCCTTCAAATGTATCAGGCCTTTCTTTGCGAAATTTGATGTTACGAGCAAACACCAGTCTGGATAGGAAATTGAGTTTGTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGACGCAGTAGTCGAAGAAAGGTCATTGCTGAACAAAGGACAGCAAGTTCCAGTCCAGAGCATCCATCATTTAAAGGACGTGGACGGTCCATGCTTAGTGGTGATAGGAAAGTATTCAGAGACTTTGCTGATGAGGAGGCTGCATCAAGGTCAGATGGTGCGTCTTCATCAGAAGCTCGTAGGATTAGAAGAAGAAGTGTCAGCATGACACCTGAGATTGGTGATGATATCGTAAGGGCTGTACGTGCGATGAATGAAACGCTGAAGCAAAATCGTCTTCTGAGAGAACGAGGAGATAATAGCTCATTCTCTGATTCTGCAAACGATGCAAATAGCATCGGAGACCTTCAGAAAAATATGTCAAATTTCCAACGAGATGGTCATGAGAGAGCTACTTTGAATTCTCTTCCACCTGATGAAGTAAATTCCCAAAAAGCAATGTCATTACCCTCTTCACCGCATGGTTATGGGGGTCAGACATCTGAGAGAAGTGGACTATCAAGATATGGCGTGAACGAACTGCAGTCAACATGGAATAAAGTCCTTGAATCTTCAATGTTTAATAATAAACCCCTCTTACCATATGAAGAATGGAATATTGACTTATCAGAAATAACTGTTGGAACACGTGTTGGGATCGGCTTTTTTGGAGAAGTATTCCGTGGCGTTTGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTCCGACATCCAAATGTAATTTTATTTCTTGGGGCGTGCACAAGGCCTCCACGCTTGTCAATGGTTACTGAGTACATGGAAATGGGATCACTGTATTACTTGATCCACTTGAGCGGCCAGAAGAAGAAGCTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACCGAATGAAGATAGTTCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAGCATTGGACTGTGAAGATCTGTGATTTTGGTCTTTCAAGGATCATGACAGAGTCTGCCATCAAAGACACTTCATCGGCTGGAACTCCAGAATGGATGGCCCCTGAACTTATTCGGAATGAACCATTCAATGAAAAATGCGATATATTTAGCCTAGGGGTGTTGATGTGGGAGCTTTGTACTTTGAACAGGCCATGGGAGGGCATACCACCAGAGAGGGTGGTTTATGCTGTTGCCAACGAGGGATCTAGGCTGGAGATTCCTGAAGGCCCGTTAGGCAAGCTTATCGCAGATTGTTGGGCAGAACCAAATGAACGGCCAAGTTGTGAGGAGATCCTTTCTCGCTTGCTTGATTGCGAGTACTCTATGTGCTGA 2478 0.4298 MLKCLDLLEDMDERRNDAGPAEQGPSNSSWWPSDFVEKFGSVSLGSQEESLNNKGSPRHFEQDVLSPYKASQIFWRTGMLAEPIPNGFYSVISDKRLKEIFDNIPTMDEIHALGGEGLKADVILVDAEKDKKLSMLKQLIVALAKGLNSNPAAIIKKIAGLVSDFYKRSNVESPAKAVVEETSHMFENRGAQILGQIKNGSCCPRAILFKVLADTVGLESRLMVGLPNDGVVECVDSYKHMSVIVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDPDSAEKEENLPFQRRFDTPSNVSGLSLRNLMLRANTSLDRKLSLSHSEPNIAIAFGRRSSRRKVIAEQRTASSSPEHPSFKGRGRSMLSGDRKVFRDFADEEAASRSDGASSSEARRIRRRSVSMTPEIGDDIVRAVRAMNETLKQNRLLRERGDNSSFSDSANDANSIGDLQKNMSNFQRDGHERATLNSLPPDEVNSQKAMSLPSSPHGYGGQTSERSGLSRYGVNELQSTWNKVLESSMFNNKPLLPYEEWNIDLSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTRPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESAIKDTSSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLNRPWEGIPPERVVYAVANEGSRLEIPEGPLGKLIADCWAEPNERPSCEEILSRLLDCEYSMC 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0986 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Prci6g0986 825 CDD STKc_MAP3K-like 575 817 - -
Prci6g0986 825 MobiDBLite consensus disorder prediction 464 479 - -
Prci6g0986 825 MobiDBLite consensus disorder prediction 494 528 - -
Prci6g0986 825 FunFam Serine/threonine-protein kinase isoform 1 559 647 - -
Prci6g0986 825 SMART serkin_6 569 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0986 825 SUPERFAMILY Protein kinase-like (PK-like) 542 817 IPR011009 -
Prci6g0986 825 MobiDBLite consensus disorder prediction 375 395 - -
Prci6g0986 825 Gene3D Transferase(Phosphotransferase) domain 1 648 824 - -
Prci6g0986 825 MobiDBLite consensus disorder prediction 282 318 - -
Prci6g0986 825 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 379 817 - -
Prci6g0986 825 Gene3D Phosphorylase Kinase; domain 1 562 647 - -
Prci6g0986 825 MobiDBLite consensus disorder prediction 500 528 - -
Prci6g0986 825 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
Prci6g0986 825 ProSiteProfiles Protein kinase domain profile. 569 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0986 825 MobiDBLite consensus disorder prediction 408 431 - -
Prci6g0986 825 MobiDBLite consensus disorder prediction 456 479 - -
Prci6g0986 825 Pfam Protein tyrosine and serine/threonine kinase 570 817 IPR001245 GO:0004672|GO:0006468
Prci6g0986 825 Pfam Ethylene-responsive protein kinase Le-CTR1 69 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0986 Prci-Chr6 6833553 6846524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0986 11 825 MAP Kinase Kinase Kinase AT3G58640 70.803 0.0 1185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Prci6g0986 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0986 - - gmx:100803469 1350.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2058 7 34613689 34631149 Prci6g0986 6 6833553 6846524 CCT
Prci6g0986 6 6833553 6846524 Prci6g0986 6 6833553 6846524 ECH