Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0976 ATGCGTCCTCCAATCAAGAAGATCAACTTTTGCAGAGGCCAGAGCGTGGAAATCTCCGTCAAGGAAGACGGGTTTCATGGATCGTACTACGAAGCGAAGGTGGTTTCTCAGCTCGATAATGGCCTCTACGTCGTCCAGTACAAGACCTTGCTCGAAGACAACGAGTTCCAATTTCTGACTGAGACTGTGTACCCCAAGGAGCTTCGTCCTCTGCCTCCCGCCATCCCTGTTCGGAGGTTTTCTACTAACCAGAAGGTCGATGCTTTCGACAACGATGGTTGGTGGGTCGGCGTTATCACTCGAAAAGATGGCCCCGACGCCTATTTCGTGTATTTCGCCACCACAGACCAGGAGATCGCTTACCCTCTCTCTCAGCTCAGGGTTCATCACGATTGGATCGGCGGCAAGTGGGTTTTGTCTAAGAAAGAAGGGAGGGCTTTCTTGTGA 447 0.5168 MRPPIKKINFCRGQSVEISVKEDGFHGSYYEAKVVSQLDNGLYVVQYKTLLEDNEFQFLTETVYPKELRPLPPAIPVRRFSTNQKVDAFDNDGWWVGVITRKDGPDAYFVYFATTDQEIAYPLSQLRVHHDWIGGKWVLSKKEGRAFL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0976 148 CDD Tudor_Agenet_AtDUF_rpt1_3 10 73 - -
Prci6g0976 148 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 142 - -
Prci6g0976 148 Gene3D - 2 81 - -
Prci6g0976 148 Pfam Agenet domain 13 73 IPR008395 -
Prci6g0976 148 CDD Tudor_Agenet_AtDUF_rpt2_4 83 128 - -
Prci6g0976 148 SMART agenet_At_2 8 76 IPR014002 -
Prci6g0976 148 SMART agenet_At_2 78 134 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0976 Prci-Chr6 6723193 6723939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0976 22 132 PHD Transcription Factor Family AT5G58610 28.030 1.58e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0976 - - gmx:106794115 185.267