Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0972 ATGGCTTCCTCCAAAGAGCGCGAGAATTTCGTCTATGTCGCCAAGCTCGCTGAGCAGGCCGAGCGATACGATGAGATGGTGGATGCTATGAAGAAGGTCGCAAATCTTGATGTTGAGCTGACTGTTGAAGAGAGAAATTTGCTCTCTGTTGGTTATAAGAATGTAATTGGTGCTCGCAGAGCATCATGGAGGATACTGTCCTCAATAGAGCAAAAAGAAGAAGCAAAAGGAAATGAAGTAAATGCCAGACGGATTAAGGAATACAGGCACAAGGTTGAATCAGAGCTTTCCAACATCTGTAATGATGTTATGAGAGTGATTGATGAGCACCTCATACCTTCTGCTACAGCTGGTGAATCAACTGTGTTTTTCTATAAGATGAAAGGAGATTATTATCGTTATCTTGCAGAGTTCAAATCTGGCAACGAGAAGAAAGAGGCAGCTGATCAGTCTATGAAAGCATATGAGGCTGCTACTGCTTCAGCAGAGGCTGAATTACCCCCTACACACCCCATCCGATTGGGTCTAGCTCTAAATTTTTCGGTTTTCTATTATGAGATCATGAATTCACCTGAAAGAGCCTGTCATCTAGCAAAGCAAGCTTTTGATGAAGCTATCTCGGAGCTTGACACCTTGAACGAGGAATCATACAAAGATAGCACGTTGATTATGCAGCTTCTCAGGGACAACCTTACCCTGTGGACTTCTGACATCCCAGAAGATGGAGAATCTAGATAA 738 0.4322 MASSKERENFVYVAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNARRIKEYRHKVESELSNICNDVMRVIDEHLIPSATAGESTVFFYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYEAATASAEAELPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGESR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0972 245 Coils Coil 145 165 - -
Prci6g0972 245 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Prci6g0972 245 Coils Coil 13 33 - -
Prci6g0972 245 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Prci6g0972 245 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Prci6g0972 245 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Prci6g0972 245 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Prci6g0972 245 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Prci6g0972 245 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Prci6g0972 245 FunFam 14-3-3 protein epsilon 2 245 - -
Prci6g0972 245 Coils Coil 195 215 - -
Prci6g0972 245 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Prci6g0972 245 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Prci6g0972 245 PIRSF 14-3-3 1 245 IPR000308 -
Prci6g0972 245 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Prci6g0972 245 Pfam 14-3-3 protein 14 235 IPR023410 -
Prci6g0972 245 SMART 1433_4 7 243 IPR023410 -
Prci6g0972 245 Gene3D - 1 244 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0972 Prci-Chr6 6692004 6695986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0972 1 242 14-3-3 family AT2G42590 83.884 3.85e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0972 K06630 - gmx:547990 442.965