Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0967 ATGGAAGAAGCATTTGATTGGAGTTCTGATGTTCGAGGAAATGCCTCAGAGAGGACTCCTCATGGTTTTCTGGATAACTCTGCTGCAATGAGAAGAGGGCTTGCTTCATCTTCTTCTCTGGTCCTGGACGGAGAGAAGGGAGAGCTTGTGGCGGCCCCTGCTAAACTGGAGCGCAAGATTGCGTCCACTGATAGAAGTATTGAAAGTTTGAAGAACCATAGCGAGGCAGAGAGGAGAAGGAGAGCAAGGATTAATGCTCATCTTGACACCCTTAGGAGTGTAGTTCCAGGCGCTAAAAAGATGGACAAAGCGTCATTACTTGGAGAGGTTATCAGACATTTGAAAGAGCTGAAAAGGAATGCAGCACAGGCATGTGAAGGTTTGATGATACCAAAGGACAACGATGAAATAAGAGTTGAAGAACAGGAGGATGGTTCAAATGGCTTCCCGTATTCGATCAAGGCATCGCTATGTTGTGAATATAAACCTGGGTTGTTGTCTGATCTAAGACAAGAACTTGATGCTCTACATCTCAGGATAATGATGGCAGAAATTGCAACCTTGGGAGGCAGGATGAAGAATATGTTTGTTATAATTAGCTGCAGAGAACAGAACATAATTGAAGATGCTGCATATCGTCAGGTTCTTGCAGTCTCTGTTCATCAAGCTATTAGGTCTGTACTTGATAGATTTTCTTCTCCAGAAGATCTGTTAGGAGCCAGCAAGAGACGGAGAATTTCTATATTCAGTTCATCACCTTTAGGAGATTTGTTGTGA 777 0.4337 MEEAFDWSSDVRGNASERTPHGFLDNSAAMRRGLASSSSLVLDGEKGELVAAPAKLERKIASTDRSIESLKNHSEAERRRRARINAHLDTLRSVVPGAKKMDKASLLGEVIRHLKELKRNAAQACEGLMIPKDNDEIRVEEQEDGSNGFPYSIKASLCCEYKPGLLSDLRQELDALHLRIMMAEIATLGGRMKNMFVIISCREQNIIEDAAYRQVLAVSVHQAIRSVLDRFSSPEDLLGASKRRRISIFSSSPLGDLL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0967 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
Prci6g0967 258 Coils Coil 166 186 - -
Prci6g0967 258 PANTHER TRANSCRIPTION FACTOR BHLH30 32 248 IPR045847 GO:0003700|GO:0006355
Prci6g0967 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 121 IPR036638 GO:0046983
Prci6g0967 258 Pfam Helix-loop-helix DNA-binding domain 72 117 IPR011598 GO:0046983
Prci6g0967 258 Gene3D - 64 125 IPR036638 GO:0046983
Prci6g0967 258 CDD ACT_UUR-ACR-like 156 198 - -
Prci6g0967 258 MobiDBLite consensus disorder prediction 1 25 - -
Prci6g0967 258 SMART finulus 74 123 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0967 Prci-Chr6 6665533 6667468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0967 35 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 38.710 1.14e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci6g0967 HLH 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0967 - - gmx:100788819 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0967 6 6665533 6667468 Prci6g0967 6 6665533 6667468 ECH