Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0958 ATGAAGGCAGCTATCTATCTTTCTGGGTTCTGTTGGATTTTGCGGGCTGTGTTTGTGCTAACATCTTTGGAAGAGGGAAAAAGTATTTCCATGGCACAATTACCACCCAAGATCCCTCACGCGGTGCTATGTGTGAATGATTTCTCTGCTTCTTCCCAACAGAAGATGCCTTCTGTGGCAAGTTTCTCGCTGGATGTTGCTGCTTCCAACAAGGACCCTTTCTGGGCGGATGAATTCCATGACTTCTCATCAGCAAGACGCCAGGCCCACCGCCGGTCGGTGAGCGATTCCATTACCTTCGTCGAGGCTCCTGTGTTGCTGGACGATTGTCATGTTAATTCTAGGAATGTCCGACCCAGGTTTGAGGCTGAGAATGAGTTTGACAGATTTGATGATGAGAAATTCATGTCCATGTTCAATAATGACTTATCTGGGGTTGCCATGCCTCTAACCTTTTCCTCTTCAAAAACACCGAGCCCATCTGATCATAACAGCATTAATGACGAGAAAGAAATCACGAACCAACTCCAACAACACCAGAACCTGCACGAGCAGAACGAAGATCAGCAGCAGCAATTGAAAAATGAATCCAATGAGGTCGATAATCATATAAGCAAATGGCAGGAAATACAACCTAATGATACGTTAGCAACTTCCTCTGACAAGATCACTGATCCCAAGAGGGTCAAGAGAATCTTGGCAAATAGGCAATCTGCACAAAGATCACGAGTGAGGAAGCTGCAATATATAAATGAGCTGGAACGTAGTGTAACTTCCTTACAGGCCGAAGTATCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTAGACAATGGTGCTCTAAAGCAACGAATTGCCGCCCTCACTCAAGACAAGATCTTTAAAGATGCTCTTCAAGATTCACTTAAGAGGGAGTTAGAGAGGCTTAGGCAAGTGTATCACCAACAAAACCTCAAGAACATGGACTATGTTGCAGGTTCAGCTTCCCCCTCACCAAATCCCCAATGCCATGGTCTGACTGAAAAGGAACAACTTCTCAACGTTTGA 1068 0.4485 MKAAIYLSGFCWILRAVFVLTSLEEGKSISMAQLPPKIPHAVLCVNDFSASSQQKMPSVASFSLDVAASNKDPFWADEFHDFSSARRQAHRRSVSDSITFVEAPVLLDDCHVNSRNVRPRFEAENEFDRFDDEKFMSMFNNDLSGVAMPLTFSSSKTPSPSDHNSINDEKEITNQLQQHQNLHEQNEDQQQQLKNESNEVDNHISKWQEIQPNDTLATSSDKITDPKRVKRILANRQSAQRSRVRKLQYINELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNGALKQRIAALTQDKIFKDALQDSLKRELERLRQVYHQQNLKNMDYVAGSASPSPNPQCHGLTEKEQLLNV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0958 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 277 IPR004827 GO:0003700|GO:0006355
Prci6g0958 355 CDD bZIP_plant_RF2 228 278 IPR044759 GO:0003700|GO:0006355
Prci6g0958 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 230 245 IPR004827 GO:0003700|GO:0006355
Prci6g0958 355 Coils Coil 306 326 - -
Prci6g0958 355 PANTHER BASIC LEUCINE ZIPPER 34 31 337 - -
Prci6g0958 355 SUPERFAMILY Leucine zipper domain 227 281 IPR046347 GO:0003700|GO:0006355
Prci6g0958 355 Pfam Basic region leucine zipper 224 272 IPR004827 GO:0003700|GO:0006355
Prci6g0958 355 Gene3D - 226 298 - -
Prci6g0958 355 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Prci6g0958 355 MobiDBLite consensus disorder prediction 176 199 - -
Prci6g0958 355 FunFam Transcription factor VIP1 226 297 - -
Prci6g0958 355 Coils Coil 169 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0958 Prci-Chr6 6586122 6590367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0958 31 304 bZIP Transcription Factor Family AT3G58120 50.166 7.33e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g0958 bZIP_2 1.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0958 - - pcin:129313713 677.167