Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0957 ATGGGGTGGGCTAGGCTAAAATATTATTGCCTAAGAGGGAAGGCAGCTATCTATCTTTCTGGGTTCTGTTGGATTTTGCGGGCTGTGTTTGTGCTAACATCTTTGGAAGAGGGAAAAAGTATTTCCATGGCACAATTACCACCCAAGATCCCTCACGCGGTGCTATGTGTGAATGATTTCTCTGCTTCTTCCCAACAGAAGATGCCTTCTGTGGCAAGTTTCTCGCTGGATGTTGCTGCTTCCAACAAGGACCCTTTCTGGGCGGATGAATTCCATGACTTCTCATCAGCAAGACGCCAGGCCCACCGCCGGTCGGTGAGCGATTCCATTACCTTCGTCGAGGCTCCTGTGTTGCTGGACGATTGTCATGTTAATTCTAGGAATGTCCGACCCAGGTTTGAGGCTGAGAATGAGTTTGACAGATTTGATGATGAGAAATTCATGTCCATGTTCAATAATGACTTATCTGGGGTTGCCATGCCTCTAACCTTTTCCTCTTCAAAAACACCGAGCCCATCTGATCATAACAGCATTAATGACGAGAAAGAAATCACGAACCAACTCCAACAACACCAGAACCTGCACGAGCAGAACGAAGATCAGCAGCAGCAATTGAAAAATGAATCCAATGAGGTCGATAATCATATAAGCAAATGGCAGGAAATACAACCTAATGATACGTTAGCAACTTCCTCTGACAAGATCACTGATCCCAAGAGGGTCAAGAGAATCTTGGCAAATAGGCAATCTGCACAAAGATCACGAGTGAGGAAGCTGCAATATATAAATGAGCTGGAACGTAGTGTAACTTCCTTACAGGCCGAAGTATCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTAGACAATGGTGCTCTAAAGCAACGAATTGCCGCCCTCACTCAAGACAAGATCTTTAAAGATGCTCTTCAAGATTCACTTAAGAGGGAGTTAGAGAGGCTTAGGCAAGTGTATCACCAACAAAACCTCAAGAACATGGACTATGTTGCAGGTTCAGCTTCCCCCTCACCAAATCCCCAATGCCATGGTCTGACTGAAAAGGAACAACTTCTCAACGTTTGA 1104 0.4493 MGWARLKYYCLRGKAAIYLSGFCWILRAVFVLTSLEEGKSISMAQLPPKIPHAVLCVNDFSASSQQKMPSVASFSLDVAASNKDPFWADEFHDFSSARRQAHRRSVSDSITFVEAPVLLDDCHVNSRNVRPRFEAENEFDRFDDEKFMSMFNNDLSGVAMPLTFSSSKTPSPSDHNSINDEKEITNQLQQHQNLHEQNEDQQQQLKNESNEVDNHISKWQEIQPNDTLATSSDKITDPKRVKRILANRQSAQRSRVRKLQYINELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNGALKQRIAALTQDKIFKDALQDSLKRELERLRQVYHQQNLKNMDYVAGSASPSPNPQCHGLTEKEQLLNV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0957 367 CDD bZIP_plant_RF2 240 290 IPR044759 GO:0003700|GO:0006355
Prci6g0957 367 SMART brlzneu 235 299 IPR004827 GO:0003700|GO:0006355
Prci6g0957 367 Pfam Basic region leucine zipper 236 284 IPR004827 GO:0003700|GO:0006355
Prci6g0957 367 Coils Coil 318 338 - -
Prci6g0957 367 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 242 257 IPR004827 GO:0003700|GO:0006355
Prci6g0957 367 Gene3D - 238 310 - -
Prci6g0957 367 MobiDBLite consensus disorder prediction 188 211 - -
Prci6g0957 367 PANTHER BASIC LEUCINE ZIPPER 34 43 349 - -
Prci6g0957 367 SUPERFAMILY Leucine zipper domain 239 293 IPR046347 GO:0003700|GO:0006355
Prci6g0957 367 FunFam Transcription factor VIP1 238 309 - -
Prci6g0957 367 Coils Coil 361 367 - -
Prci6g0957 367 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 237 289 IPR004827 GO:0003700|GO:0006355
Prci6g0957 367 Coils Coil 181 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0957 Prci-Chr6 6585820 6590368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0957 43 316 bZIP Transcription Factor Family AT3G58120 50.166 2.22e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g0957 bZIP_2 1.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0957 - - pcin:129313713 707.212