Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0950 ATGGAATCCCAAAACAAAGAGCTTGGAGCAACAAGACTCCTCGATGCTCAGAACCATATATGGAAACACACATTCAGCTTCATAAACTCAATGTGTCTCAAGTTAGCCACAGAATTAAACATCCCAGAAACCATTCACAAGCATGGCAAGCCCATGCCTCTGCCTCTTCTCGTCTCTTCCCTGCAAATCCACCCCTCCAAATCTCCAAACGTTTATCGCATAATGCGACTCCTCACCTACTCTGGCTTCTTTTCCCTCCAGAAAGTTTCAGAAACTGATGATTCTTCAGAACAAGGCTATGTCCTAACTGATGCATCCACCCTACTTCTCAAGGACCATCCCTTAAGTACCACCCCTTTCTTCCTTGTTATGGTGGATCCCAACCTAAAAAGGCCTTGGTATGAGCTCACCAATTGGCTCCAAACTGATGATTATCCGTCGCCGTTTCACATGGCGTATGGGAAGAAGATTTGGGAGCATGCCAAGGTTGACCCTAATTTTAATCATTCTTTCAATGAAGCTATGGCCAGTGATACGAGACTGGTGATAAGTGTGGCGATTGACACCTGCAAAGAGGTGTTCATGGGAATAAAGTCCTTGGTGGATGTTGGGGGTGGCACTGGGGCTACAGCTAAGGCCGTTGCTGAAGCCTTTCACGACATAGAATGTATTGTGTTCGATCTCCCGCATGTTGTCAATGGCTTACAGGGTAGTGCGAATCTCAACTTTGTGGGAGGCAACATGTTCGAGGCGATTCCTCCATGTGATGCCATACTGATGAAGTGGATACTGCATGACTGGACGGATGAGGAGTGTGTGAAGATTTTGAAGAAGTGCAAGGAGGGAATTGGGAGCAGAGGGAGAGATGGGAAGTTGATAATAATAGATATGGTGTTGGAGGATGACGTGGTAGCCAAACGCAGTAAATCAGCTGAGAATCAGTTGTTGGTGGATGTGCTGTTGATGGTGCTGTATCCTGGAAAAGAGAGGACTGAGAAAGAGCTCGCCAACTTATTCCGTTCTGCTGGTTTTAGTGATTATAAGATTCATCCAGTTCTAGGTTCCAGATCCATCATCGAGGTTTATCCATGA 1092 0.4597 MESQNKELGATRLLDAQNHIWKHTFSFINSMCLKLATELNIPETIHKHGKPMPLPLLVSSLQIHPSKSPNVYRIMRLLTYSGFFSLQKVSETDDSSEQGYVLTDASTLLLKDHPLSTTPFFLVMVDPNLKRPWYELTNWLQTDDYPSPFHMAYGKKIWEHAKVDPNFNHSFNEAMASDTRLVISVAIDTCKEVFMGIKSLVDVGGGTGATAKAVAEAFHDIECIVFDLPHVVNGLQGSANLNFVGGNMFEAIPPCDAILMKWILHDWTDEECVKILKKCKEGIGSRGRDGKLIIIDMVLEDDVVAKRSKSAENQLLVDVLLMVLYPGKERTEKELANLFRSAGFSDYKIHPVLGSRSIIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0950 363 PANTHER O-METHYLTRANSFERASE 16 348 IPR016461 GO:0008168
Prci6g0950 363 FunFam Coniferyl alcohol 9-O-methyltransferase 3 109 - -
Prci6g0950 363 CDD AdoMet_MTases 200 288 - -
Prci6g0950 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Prci6g0950 363 FunFam O-methyltransferase ZRP4 111 363 - -
Prci6g0950 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 362 IPR029063 -
Prci6g0950 363 SUPERFAMILY "Winged helix" DNA-binding domain 12 114 IPR036390 -
Prci6g0950 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Prci6g0950 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Prci6g0950 363 Gene3D Vaccinia Virus protein VP39 110 363 IPR029063 -
Prci6g0950 363 Pfam O-methyltransferase domain 133 345 IPR001077 GO:0008171
Prci6g0950 363 Gene3D - 2 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0950 Prci-Chr6 6525080 6526545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0950 31 349 Monolignol Biosynthesis Gene Families AT5G54160 36.923 9.37e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0950 - - gmx:100794122 432.18