Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0949 ATGGAATCCCAAAACAAAGGGCTCGGAGCAACAAAGCTCGTTCTTGCTCAAACCCATATATGGAACCACACATTCAGCTTCATAAACTCCATGTGTCTCAAGTCAGCTATCGAACTCAACATTCCAGAAATCATTCATAAGCATGGCAAGCCCGTGCCTCTTCCCCTTCTCGTCTCTTCCCTGCAAATCCAACCTTGTAAATCTCCAAACATTCATCGTTTAATGCGACTCCTCACCCATTTCGGATTCTTCTCTCTCCGGAAACTTGTAGAAACTGATGATGACACTTCAGAACAAGGCTATGTCCTAACTGATTCATCCACCCTCCTTCTCAAGGACCACCCCTTGAGCGCAACCCCTTTCTTCCTCGCCATGCTTGATCCTGTCCTGAAAAAGCCCTGGTATGAGATGACCAACTGGTTCCAAAGTGACAATCCCACTTCATTTCACACAGCTCATGGGAAGACGTTTTGGGAGTTTGCCAACGTTGACCCTGTTTTTAATCACTTTTTCAATGAAGCCATGGCTAGTGATGCGACATTGGTGATAAGTGTGGTGGTTGATGAGTGTAAAGGGGTGTTTAATGGAATAAAGTCGTTGGTAGATGTTGGGGGTGGCACAGGGACTGTGTCTAAGGCCATTGCCAAAGCTTTTCCAGAGATACAGTGTACTGTGTTTGACCTGCCGCATGTTGTTGATGGCCTGCAAGGTACTAGGAATCTCAAGTTTGTCGGAGGGAACATGTTCGAGGCCATTCCTCCTTCAGATGCCATATTGTTGAAGTGGGTACTGCATGATTGGAACGACGAGGAGTGCCTGAAAATTCTGAAGAAATGTAAGGAGGGAATTGCGAGGAAAGGGAAAGCAGGAAAGGTGATAATAATAGACATGATAATGGAGAATGAGAAGGCAGATATGATCCGTGACATATCAACTGAGAATCAACTGTTTTTTGATATGCTGATGATGGTCTTGCTTGCGGGAAAAGAGAGGAGTGAGAAAGAATGGGCCAAATTAAAATGCTCGGCGGGTTTTAGCGACTACAAGATTTATCCCATTCTAGGTCCACGATCTCTCATAGAGGTTTATCCATAA 1095 0.4493 MESQNKGLGATKLVLAQTHIWNHTFSFINSMCLKSAIELNIPEIIHKHGKPVPLPLLVSSLQIQPCKSPNIHRLMRLLTHFGFFSLRKLVETDDDTSEQGYVLTDSSTLLLKDHPLSATPFFLAMLDPVLKKPWYEMTNWFQSDNPTSFHTAHGKTFWEFANVDPVFNHFFNEAMASDATLVISVVVDECKGVFNGIKSLVDVGGGTGTVSKAIAKAFPEIQCTVFDLPHVVDGLQGTRNLKFVGGNMFEAIPPSDAILLKWVLHDWNDEECLKILKKCKEGIARKGKAGKVIIIDMIMENEKADMIRDISTENQLFFDMLMMVLLAGKERSEKEWAKLKCSAGFSDYKIYPILGPRSLIEVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0949 364 PANTHER O-METHYLTRANSFERASE 20 349 IPR016461 GO:0008168
Prci6g0949 364 Pfam O-methyltransferase domain 134 346 IPR001077 GO:0008171
Prci6g0949 364 FunFam O-methyltransferase ZRP4 112 364 - -
Prci6g0949 364 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Prci6g0949 364 CDD AdoMet_MTases 200 295 - -
Prci6g0949 364 Gene3D - 2 110 IPR036388 -
Prci6g0949 364 Gene3D Vaccinia Virus protein VP39 111 364 IPR029063 -
Prci6g0949 364 SUPERFAMILY "Winged helix" DNA-binding domain 15 115 IPR036390 -
Prci6g0949 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
Prci6g0949 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Prci6g0949 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 363 IPR029063 -
Prci6g0949 364 FunFam Coniferyl alcohol 9-O-methyltransferase 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0949 Prci-Chr6 6508369 6509714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0949 31 350 Monolignol Biosynthesis Gene Families AT5G54160 35.976 7.14e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0949 - K16040 qsa:O6P43_000776 484.952