Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0948 ATGGAATCCCAGAACGAAGAGCATTATTCAGCTTCGAGACTCTTTCATGCTCAAACCCACATATGGAACCACATCTTCAGCTTCATAAACTCAATGTCCCTCAAATGTGCAATAGATTTGAACATTCCTGATATCATTCACAAGCATGGAAAACCCATGCCTCTTCCCCTTCTCATCTCTTCTCTTCAAATCCACCCTTCTAAAACTCGAAATATCTATCGTTTAATGCGAATCCTCTCCCATTCTGGATTCTTCTCTCTCCAGAAACTTCCCGATGAAGTAGAAGAAGAAGGCTATGTCCTTACAGATGCATCGACCCTTCTTTTGAAGGACAATCCCTTAAGTGTGACCCCTTTCTTGCTTGCCATGCTGGATCCCATCCTTACGAAGCCTTGGTATGAGGTGGCAAACTGGTTCCAGAACGACGATCCGACGCCGTTTGATACGGCACATGGGAAGACGTTTTGGGAGTATGCTGGGGTTGAGCCAAAGCTTAATCATTTCTTCAATGATGCTATGGCTAGTGATGCGAGGTTGGTGACCAGTGTGGTGATTGATAAGTGCAAGGGTGTGTTTAAGGGATTAGAGTCACTGGTTGACGTTGGGGGTGGTACTGGGACTGTGGCTAAGGCCATTGCTAAAGCTTTTCCGGAAATACAATGTACTGTGTTCGATCTTCCACACGTTGTTGCTGGTCTGCAAGATAGTGGGAATCTCAACTTTGTCGGAGGAGACATGTTCGAGGCCGTTCCTCCTTCCGATGGCATACTATTGAAGTGGATTCTACATGATTGGAACGATGGGGAATGTGTGAAGATACTGAAGAAGAGCAAGGAAGCAATTACAAAGAAAGGGAAAGAAGGGAAAGTGATCATAATAGACATGATGATGGAGAATGCCAAGGGAGACATCGACGATGAATCAGTAGAAACACAACTGTTCTTTGACATGTTGATGATGGTTTTGGTCACTGGAAAAGAGAGGAACGAGAAAGAGTGGGCCAAGTTGATCTTCTCTGCTGGTTTCAGTGACTATAAGATTACTCCAGTTCTGGGCTTAAGATCTCTCATTGAGGTGTTCCCATGA 1086 0.4466 MESQNEEHYSASRLFHAQTHIWNHIFSFINSMSLKCAIDLNIPDIIHKHGKPMPLPLLISSLQIHPSKTRNIYRLMRILSHSGFFSLQKLPDEVEEEGYVLTDASTLLLKDNPLSVTPFLLAMLDPILTKPWYEVANWFQNDDPTPFDTAHGKTFWEYAGVEPKLNHFFNDAMASDARLVTSVVIDKCKGVFKGLESLVDVGGGTGTVAKAIAKAFPEIQCTVFDLPHVVAGLQDSGNLNFVGGDMFEAVPPSDGILLKWILHDWNDGECVKILKKSKEAITKKGKEGKVIIIDMMMENAKGDIDDESVETQLFFDMLMMVLVTGKERNEKEWAKLIFSAGFSDYKITPVLGLRSLIEVFP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0948 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 359 IPR029063 -
Prci6g0948 361 Gene3D - 3 108 IPR036388 -
Prci6g0948 361 SUPERFAMILY "Winged helix" DNA-binding domain 13 113 IPR036390 -
Prci6g0948 361 Gene3D Vaccinia Virus protein VP39 109 361 IPR029063 -
Prci6g0948 361 FunFam Coniferyl alcohol 9-O-methyltransferase 4 108 - -
Prci6g0948 361 FunFam O-methyltransferase ZRP4 110 361 - -
Prci6g0948 361 PANTHER O-METHYLTRANSFERASE 17 346 IPR016461 GO:0008168
Prci6g0948 361 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Prci6g0948 361 Pfam O-methyltransferase domain 132 343 IPR001077 GO:0008171
Prci6g0948 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Prci6g0948 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0948 Prci-Chr6 6498270 6500167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0948 32 347 Monolignol Biosynthesis Gene Families AT5G54160 33.127 3.48e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0948 - K16040 qsa:O6P43_028865 574.704