Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0939 ATGGAGGCTTGTTCAGAAGAAGAGAAGAAGCCACCTGTGGGAGAGACTAAGACAAAGCGCAAAATGAAGACTGCTTCCCAGTTGGAGATTCTGGAGAAAACTTATGCTACGGAACCGAATCCATCCGAGTCATTGCGAGCAGAGCTATCGGCGAAATTGGGTCTTTCGGATCGTCAACTGCAAATGTGGTTTTGTCACCGTAGGTTGAAAGACAGAAAGGCACCGGCAGCGAAGAGGCCGGGAAATGAATCGCCAGCTGTAGCGGTGACTCCGGAGGCAGATGGTTTTGAGCGGAAGGTAATGGGTGATGGCGGGCATTCGCGTGATTCCATTTCTGGGTCGATGCCATTCAGTCATATGGATTCACAGCGAGTTGTCCCTCGACCTGGTATGGCATTTCCTAGTATTGGAGGGGGATTGCTAGCAATGGGTTACTATGAACCACATCAGTCCAAAGCTAAGCTGAAAGCTATTGCATTTGTGGAAGCACAGTTAGGAGGACCATTTAGAGACGACGGGCCAATTTTGGGGATGGAATTTGATCCGTTGCCACCCGGTGCGTTTGGTGCACCAATAGGTCCAACTGCAATGGGAAAGCATTGGCAATCTACTAGGCCTTTTGAGGCAAAAATTTATGAACGATTGGACAAGGGCGGTTCAAGGACTCTCCATGAATATAAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGACATATGATTATGAGAGAGTCGCCTCTGCTAACCACTATGGTTCTCTTGATGGAATTCCACATTCAAGGACTTTATTTTCTAGTGGCCGAAGTCTACTTAATAAGAATGAAGTTGCTTCCTATGGTTATGGATATCAAAATCTAATGCCAGGGTTAAATCTTTTGTCTCAGCAAGGCAGGCAGAATCATCTTTTACCTTCTGCTTCTGGACAGAATGATAATCTTCCACGGAGGAATATGTTTGTTGATGTGCCTGTTGACTCTTATATTGGAGCTTACCCAGCAACTCAGATTGACAGCATGTCAACACCATCTGACCAGAAGGTTATCCATGAGGAGCAAAATTCACGGTTTCAAAGGAAGCGGAAGAATGAAGAGGCTAGAATGCAGCGGGAGCTTGAGGCACAAGAGAAGAGAATCAGAAAAGAGCTTGAAAAGCAGGATATTTTAAGGCGAAAGAGAGAAGAGCAAGCAAGGAAGGAGATGGAGAGGCATGAACGTGAAAGGCAGAAGGAAGAGGAAAGGCTATTGCGTGAAAGACGGAGGGAAGAGGAGAGATACCAAAGAGAACAGAGGCGTGAACTAGAACGGAGGGAGAAGATTTTGCAGAAAGAGTCAATCAGACTCTTGCAGGCTGAGAAAAGGAAACAGAAGGAAGAATTACGCAAAGAGAAAGAGGCAGCAAGGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGCAGAATGGGCAAAGAATCAATTGAACTTATTGAAGATGAGCGACTGGAATTGATGGAGCTAGCTGCATCAGAAAAGGGACTTTCTTCAATTTTGTCTCTTGACTGTGAGACTTTAGAAAATCTTGAATTATTTAAGGATGGGCGGACATCATTTCCACCTAAGGCTGTACTGCTGAAAAGACCTTTCTCAATTCAGCCTTGGTTGGATTCTGAGGACAACATAGGAAACCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTGCTGATGTTCTTGGGATTTGGCCATTCACCTTGGATGAATTTTTACAAGCTTTCCATGACCATGATCCTAGGTTGTTAGGTGAGATTCATATTGCTCTTTTGAGATGTATCATAAAAGATATTGAAGATGTTGCAAGAACTACTGGGGTAGGAGCTAATCATAACAGTGCTGTCAACCCTTGTGGGGGTCATCCGCAAGTAGTTGAAGGGGCATATTTTTGGGGGTTTGATATAAGAAGTTGGCAGCGACTCTTAAATCCCTTGACATGGCCAGAAATTATGCGACAATTTGCTTTATCAGCTGGATTTGGGCCACGATTGAGTAGAAGAATCAATGAGCAGGTGTACCCTTGTGATAACAATCAGGGTATTGACGGTGAAGATGTTATTTCCAATCTACGAAGTGGGGCTGCAGTTGAAAATGCTGTTGCTATCATGCAAGAGAAGGGATTATCTAACCAACGAAGATCTAGGCATCGCTTGACACCTGGAACTGTTAAGTTTGCAGCATTTCATGTCCTATCTCTTGAAGGAAGTAAGGGCCTTACCATATTGGAAACTGCAGGCAAGATTCAGAAATCTGGACTTCGTGATCTTACAACAAGCAAAACTCCTGAGGCTTCTATAGCTGCTGCTTTGTCCAGGGACACAAAGCTTTTTGAAAGGACTGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGATCCAGCCGATGGTGATGCAATCCTCTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAATGGACTTGTTGATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCAGAAATTGACATGGCAGAAGATCCTGGGGTTTATGATTTAGGTACTGAAACAAACAACAAGGAGGCTTCTGATTTAGTGGAATGCAGTTTGAACACTGTAGTTAAGAATAGAGAAGGCAGTGGTGAAATTTTGTGGACTCCTGATGGTAGTGGCAATGTTGCAAGTAAACCTGATTTAGAAGACACCGCCAGTATTGATGAAAGTAATCGAGGTGAACCATGGGTTGAGGGGCTTATCGAAGGAGAATACTCAGATCTTAGTGTTGAAGAGCGACTTAATGCCCTTGTTGCTCTGATTGGTGTGGCAATTGAAGGAAATTCAATCCGTGTTGTTCTTGAGGAGCGTCTAGAAGCAGCAATTGCTTTAAAGAAGCAGATGTGGGCAGAGGTGCAGCTTGATAGACACCGAATCAAAGAGAACTACCTTTTCAAGATGCAGTCTGCCCGTTGTGTGGCCAATAAGAATGAACCAACTCCTTCAATGTCATCCATGGAGGGTAAACAGGGCCCTTTGCTTGGTGTCGATGACAGGAATGACAAGACACTACCAACTCCCCCCACCCAGCAAGTACAGTTAAATGATAATCAGACCCATCTTCAGAGTGTTCTACCAGAAGTGAACATAAAAATGCAAGACTCTGCTGTCCCTTATAATTATTCTTGCCAACAATTTGGACCTGGTGCTGAAATGTCAAGACCCAATTTCAAGTCATGCATTGGTCAATTGGCTGAAGAAACTTATATTTATAGGTCATTGCCACTTGGTTTGGATCGGAGACGTAATCGATACTGGCAGTTCATTACATGTGCTTCTCAAAATGATCCAGGCTGTGGTAGGATTTTTGTGGAAATGCACGATGGTTGTTGGAGGCTAATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGCATCATTGGATGTACGTGGGATTAGGGAATCTCATTTGCACATGATGTTGCGACGTATTGAAAGGTCTTTCAAGGAATCTGTTAAAAGGAATAACTTGAGGAGGCAAGAGGGGGACACTGTTAATAAATCTTTTCAAATGACTGCTGAGCATGATTGCTGTGCTTCCATGTGCAGTACTAATTTAGATTTGTCAGAGACATCAACATCTTTTGTGGTTCAGCTTGGAAGGAATGATTCTGATAACCAAGATGCTTTGAGGAGATACCAGGACTTTGAAAAATGGATGCTTAAGGAAGGCATAAATTCCTCAGTATTATGTGCGTTGAGGGCTGGGAAGAGAAGGTGCAGTCAATTTCTGGGCATGTGTGATTTCTGCCATGAGATCCATTTATCTGAAGAAATTCCATCTCCTTCCTGCTATAGAACCCTTCGTATTTGTAAGAGCAACTTAAGCTCTTCTGAACATATGGCTCAATATGAAGGAAAATTGAAGATTACTGATGATTATGTAATTAATGTGTCCCCCTCTTATCCATTGAGACTGAGATTGCTTAAAGTGCTGTTGTCAATAGTTGAGGTTTCCATTCCTCGAGAAGCACTTAAACCTATTTGGACAGACAACTATCGGAAGTCTTGGGGTATAAAGCTGCATGCTTCATCTTCCTCTGAAGAACTTCTTGAGTGGGTAACATATCTAGAAGATACAACGGGACAATCGATTCTCAATTTCCTGTAG 4161 0.4321 MEACSEEEKKPPVGETKTKRKMKTASQLEILEKTYATEPNPSESLRAELSAKLGLSDRQLQMWFCHRRLKDRKAPAAKRPGNESPAVAVTPEADGFERKVMGDGGHSRDSISGSMPFSHMDSQRVVPRPGMAFPSIGGGLLAMGYYEPHQSKAKLKAIAFVEAQLGGPFRDDGPILGMEFDPLPPGAFGAPIGPTAMGKHWQSTRPFEAKIYERLDKGGSRTLHEYKFIPEQPTVRNETYDYERVASANHYGSLDGIPHSRTLFSSGRSLLNKNEVASYGYGYQNLMPGLNLLSQQGRQNHLLPSASGQNDNLPRRNMFVDVPVDSYIGAYPATQIDSMSTPSDQKVIHEEQNSRFQRKRKNEEARMQRELEAQEKRIRKELEKQDILRRKREEQARKEMERHERERQKEEERLLRERRREEERYQREQRRELERREKILQKESIRLLQAEKRKQKEELRKEKEAARIKAANERAIARRMGKESIELIEDERLELMELAASEKGLSSILSLDCETLENLELFKDGRTSFPPKAVLLKRPFSIQPWLDSEDNIGNLLMVWRFLISFADVLGIWPFTLDEFLQAFHDHDPRLLGEIHIALLRCIIKDIEDVARTTGVGANHNSAVNPCGGHPQVVEGAYFWGFDIRSWQRLLNPLTWPEIMRQFALSAGFGPRLSRRINEQVYPCDNNQGIDGEDVISNLRSGAAVENAVAIMQEKGLSNQRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILETAGKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVRPAYRKDPADGDAILSAARERIRIFKNGLVDAEEPDDGERDDDSEIDMAEDPGVYDLGTETNNKEASDLVECSLNTVVKNREGSGEILWTPDGSGNVASKPDLEDTASIDESNRGEPWVEGLIEGEYSDLSVEERLNALVALIGVAIEGNSIRVVLEERLEAAIALKKQMWAEVQLDRHRIKENYLFKMQSARCVANKNEPTPSMSSMEGKQGPLLGVDDRNDKTLPTPPTQQVQLNDNQTHLQSVLPEVNIKMQDSAVPYNYSCQQFGPGAEMSRPNFKSCIGQLAEETYIYRSLPLGLDRRRNRYWQFITCASQNDPGCGRIFVEMHDGCWRLIDSEEGFDALLASLDVRGIRESHLHMMLRRIERSFKESVKRNNLRRQEGDTVNKSFQMTAEHDCCASMCSTNLDLSETSTSFVVQLGRNDSDNQDALRRYQDFEKWMLKEGINSSVLCALRAGKRRCSQFLGMCDFCHEIHLSEEIPSPSCYRTLRICKSNLSSSEHMAQYEGKLKITDDYVINVSPSYPLRLRLLKVLLSIVEVSIPREALKPIWTDNYRKSWGIKLHASSSSEELLEWVTYLEDTTGQSILNFL 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0939 1386 SMART testlast3 549 608 IPR018501 -
Prci6g0939 1386 MobiDBLite consensus disorder prediction 826 850 - -
Prci6g0939 1386 MobiDBLite consensus disorder prediction 829 845 - -
Prci6g0939 1386 Coils Coil 440 476 - -
Prci6g0939 1386 ProSiteProfiles HARE-type HTH domain profile. 729 798 IPR007759 GO:0006355
Prci6g0939 1386 Pfam DDT domain 551 605 IPR018501 -
Prci6g0939 1386 SUPERFAMILY Homeodomain-like 12 73 IPR009057 -
Prci6g0939 1386 MobiDBLite consensus disorder prediction 335 368 - -
Prci6g0939 1386 ProSiteProfiles DDT domain profile. 549 608 IPR018501 -
Prci6g0939 1386 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 6 1383 IPR044977 GO:0006357
Prci6g0939 1386 SMART HOX_1 16 78 IPR001356 GO:0003677
Prci6g0939 1386 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1089 1161 IPR028941 -
Prci6g0939 1386 MobiDBLite consensus disorder prediction 97 117 - -
Prci6g0939 1386 Pfam HB1, ASXL, restriction endonuclease HTH domain 729 796 IPR007759 GO:0006355
Prci6g0939 1386 ProSiteProfiles 'Homeobox' domain profile. 14 74 IPR001356 GO:0003677
Prci6g0939 1386 CDD homeodomain 17 73 IPR001356 GO:0003677
Prci6g0939 1386 MobiDBLite consensus disorder prediction 348 368 - -
Prci6g0939 1386 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 910 952 IPR028942 -
Prci6g0939 1386 Gene3D - 7 86 - -
Prci6g0939 1386 MobiDBLite consensus disorder prediction 1 25 - -
Prci6g0939 1386 MobiDBLite consensus disorder prediction 394 413 - -
Prci6g0939 1386 Coils Coil 346 431 - -
Prci6g0939 1386 Pfam Homeodomain 17 73 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0939 Prci-Chr6 6413189 6423070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0939 14 1384 Homeobox Transcription Factor Family AT5G44180 50.990 0.0 1224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci6g0939 WSD 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0939 - - pcin:129313496 2586.99