Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0938 ATGGAGGCTTGTTCAGAAGAAGAGAAGAAGCCACCTGTGGGAGAGACTAAGACAAAGCGCAAAATGAAGACTGCTTCCCAGTTGGAGATTCTGGAGAAAACTTATGCTACGGAACCGAATCCATCCGAGTCATTGCGAGCAGAGCTATCGGCGAAATTGGGTCTTTCGGATCGTCAACTGCAAATGTGGTTTTGTCACCGTAGGTTGAAAGACAGAAAGGCACCGGCAGCGAAGAGGCCGGGAAATGAATCGCCAGCTGTAGCGGTGACTCCGGAGGCAGATGGTTTTGAGCGGAAGGTAATGGGTGATGGCGGGCATTCGCGTGATTCCATTTCTGGGTCGATGCCATTCAGTCATATGGATTCACAGCGAGTTGTCCCTCGACCTGGTATGGCATTTCCTAGTATTGGAGGGGGATTGCTAGCAATGGGTTACTATGAACCACATCAGTCCAAAGCTAAGCTGAAAGCTATTGCATTTGTGGAAGCACAGTTAGGAGGACCATTTAGAGACGACGGGCCAATTTTGGGGATGGAATTTGATCCGTTGCCACCCGGTGCGTTTGGTGCACCAATAGGTCCAACTGCAATGGGAAAGCATTGGCAATCTACTAGGCCTTTTGAGGCAAAAATTTATGAACGATTGGACAAGGGCGGTTCAAGGACTCTCCATGAATATAAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGACATATGATTATGAGAGAGTCGCCTCTGCTAACCACTATGGTTCTCTTGATGGAATTCCACATTCAAGGACTTTATTTTCTAGTGGCCGAAGTCTACTTAATAAGAATGAAGTTGCTTCCTATGGTTATGGATATCAAAATCTAATGCCAGGGTTAAATCTTTTGTCTCAGCAAGGCAGGCAGAATCATCTTTTACCTTCTGCTTCTGGACAGAATGATAATCTTCCACGGAGGAATATGTTTGTTGATGTGCCTGTTGACTCTTATATTGGAGCTTACCCAGCAACTCAGATTGACAGCATGTCAACACCATCTGACCAGAAGGTTATCCATGAGGAGCAAAATTCACGGTTTCAAAGGAAGCGGAAGAATGAAGAGGCTAGAATGCAGCGGGAGCTTGAGGCACAAGAGAAGAGAATCAGAAAAGAGCTTGAAAAGCAGGATATTTTAAGGCGAAAGAGAGAAGAGCAAGCAAGGAAGGAGATGGAGAGGCATGAACGTGAAAGGCAGAAGGAAGAGGAAAGGCTATTGCGTGAAAGACGGAGGGAAGAGGAGAGATACCAAAGAGAACAGAGGCGTGAACTAGAACGGAGGGAGAAGATTTTGCAGAAAGAGTCAATCAGAGCTGAGAAAAGGAAACAGAAGGAAGAATTACGCAAAGAGAAAGAGGCAGCAAGGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGCAGAATGGGCAAAGAATCAATTGAACTTATTGAAGATGAGCGACTGGAATTGATGGAGCTAGCTGCATCAGAAAAGGGACTTTCTTCAATTTTGTCTCTTGACTGTGAGACTTTAGAAAATCTTGAATTATTTAAGGATGGGCGGACATCATTTCCACCTAAGGCTGTACTGCTGAAAAGACCTTTCTCAATTCAGCCTTGGTTGGATTCTGAGGACAACATAGGAAACCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTGCTGATGTTCTTGGGATTTGGCCATTCACCTTGGATGAATTTTTACAAGCTTTCCATGACCATGATCCTAGGTTGTTAGGTGAGATTCATATTGCTCTTTTGAGATGTATCATAAAAGATATTGAAGATGTTGCAAGAACTACTGGGGTAGGAGCTAATCATAACAGTGCTGTCAACCCTTGTGGGGGTCATCCGCAAGTAGTTGAAGGGGCATATTTTTGGGGGTTTGATATAAGAAGTTGGCAGCGACTCTTAAATCCCTTGACATGGCCAGAAATTATGCGACAATTTGCTTTATCAGCTGGATTTGGGCCACGATTGAGTAGAAGAATCAATGAGCAGGTGTACCCTTGTGATAACAATCAGGGTATTGACGGTGAAGATGTTATTTCCAATCTACGAAGTGGGGCTGCAGTTGAAAATGCTGTTGCTATCATGCAAGAGAAGGGATTATCTAACCAACGAAGATCTAGGCATCGCTTGACACCTGGAACTGTTAAGTTTGCAGCATTTCATGTCCTATCTCTTGAAGGAAGTAAGGGCCTTACCATATTGGAAACTGCAGGCAAGATTCAGAAATCTGGACTTCGTGATCTTACAACAAGCAAAACTCCTGAGGCTTCTATAGCTGCTGCTTTGTCCAGGGACACAAAGCTTTTTGAAAGGACTGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGATCCAGCCGATGGTGATGCAATCCTCTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAATGGACTTGTTGATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCAGAAATTGACATGGCAGAAGATCCTGGGGTTTATGATTTAGGTACTGAAACAAACAACAAGGAGGCTTCTGATTTAGTGGAATGCAGTTTGAACACTGTAGTTAAGAATAGAGAAGGCAGTGGTGAAATTTTGTGGACTCCTGATGGTAGTGGCAATGTTGCAAGTAAACCTGATTTAGAAGACACCGCCAGTATTGATGAAAGTAATCGAGGTGAACCATGGGTTGAGGGGCTTATCGAAGGAGAATACTCAGATCTTAGTGTTGAAGAGCGACTTAATGCCCTTGTTGCTCTGATTGGTGTGGCAATTGAAGGAAATTCAATCCGTGTTGTTCTTGAGGAGCGTCTAGAAGCAGCAATTGCTTTAAAGAAGCAGATGTGGGCAGAGGTGCAGCTTGATAGACACCGAATCAAAGAGAACTACCTTTTCAAGATGCAGTCTGCCCGTTGTGTGGCCAATAAGAATGAACCAACTCCTTCAATGTCATCCATGGAGGGTAAACAGGGCCCTTTGCTTGGTGTCGATGACAGGAATGACAAGACACTACCAACTCCCCCCACCCAGCAAGTACAGTTAAATGATAATCAGACCCATCTTCAGAGTGTTCTACCAGAAGTGAACATAAAAATGCAAGACTCTGCTGTCCCTTATAATTATTCTTGCCAACAATTTGGACCTGGTGCTGAAATGTCAAGACCCAATTTCAAGTCATGCATTGGTCAATTGGCTGAAGAAACTTATATTTATAGGTCATTGCCACTTGGTTTGGATCGGAGACGTAATCGATACTGGCAGTTCATTACATGTGCTTCTCAAAATGATCCAGGCTGTGGTAGGATTTTTGTGGAAATGCACGATGGTTGTTGGAGGCTAATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGCATCATTGGATGTACGTGGGATTAGGGAATCTCATTTGCACATGATGTTGCGACGTATTGAAAGGTCTTTCAAGGAATCTGTTAAAAGGAATAACTTGAGGAGGCAAGAGGGGGACACTGTTAATAAATCTTTTCAAATGACTGCTGAGCATGATTGCTGTGCTTCCATGTGCAGTACTAATTTAGATTTGTCAGAGACATCAACATCTTTTGTGGTTCAGCTTGGAAGGAATGATTCTGATAACCAAGATGCTTTGAGGAGATACCAGGACTTTGAAAAATGGATGCTTAAGGAAGGCATAAATTCCTCAGTATTATGTGCGTTGAGGGCTGGGAAGAGAAGGTGCAGTCAATTTCTGGGCATGTGTGATTTCTGCCATGAGATCCATTTATCTGAAGAAATTCCATCTCCTTCCTGCTATAGAACCCTTCGTATTTGTAAGAGCAACTTAAGCTCTTCTGAACATATGGCTCAATATGAAGGAAAATTGAAGATTACTGATGATTATGTAATTAATGTGTCCCCCTCTTATCCATTGAGACTGAGATTGCTTAAAGTGCTGTTGTCAATAGTTGAGGTTTCCATTCCTCGAGAAGCACTTAAACCTATTTGGACAGACAACTATCGGAAGTCTTGGGGTATAAAGCTGCATGCTTCATCTTCCTCTGAAGAACTTCTTGAGATATTGACTATACTGGAGAGTGCTATCAAGAGGGATTACTTGGTTTCAAACTTCAAGACTACCGGTGAGCTGTTGGGTTCTATTTTTTCTTCTGGATTTCAGAGTGATTCCGTGGGAGCTGAAAGGATTCCTGTACTGCCCTGGGTGCCTCATACAACTGCTGCTGTGGCATTAAGGCTCATGGAACTTGACATCTCCCTGTTTTATTCCTTAGAGCAGAAGCTGGAGTCTGAAAAGGACAAGACAAATGAGAATATTATGAAGTTTCCTCCGAAACATGTTTCTGCCAAGAATGCCATAGGTGCTTGTACAGCTGAGACTTCTCATCTGGCTGGGCATAGCTTGGTCGATCTTGGTGCTGGATTTGCTAGCTACAGTCGAGGACAAAGGTACTGTGGACAGGACCGTGATCGCACTCATGGAGGGAGATCGCAAGGAAGGGTCATAAATTCAAGATCTGAATGTAAAAAAAAAGCTACTGCCACTAGCCGCAGGAGACTTGGACAGGGACTAAGATGGAAAGGTAAATCACGAGGTCGTGGAGGCAATCGCCGTGCTCGTCAAAGCATCAGAAGCAGCAGGCAGAAACCAGCAGCTAAAGAGCAAGAGGTTACTGTTGAGAGGAATGCTCCCCAAGGGGAATCTGCCGGTATTTTTGTCAGGGAGGGAAGCAATGAAGCTGAAACTTTTGGATGTCAAATGGAGATTCCCGAAAATGCTGCAAGCAGTTCCGGGAGATCAGATTATGAGGAAAATAAATATAATGTGACAGGTGACGATAATGATTATCTAGTGGATAATAATGATAATGGCTACGATGGGGGCGGATTTAGTGGGAAGTCTGGGAATATAGAAGATATTAATTTTGATTTAGATGATGAAGATGGAGATGGGGTTGGTGGATATAGTGGGAAGTCTGACGATTTAATAGAAGGGATTGGTTTTGACATAGATGATGAGGAAGAAGAGGATATTGATGACGACGAGGATGATGAGCAGGTTCATGTTGAAGACTTCATAAACGGGGATTCAGATATAGGAGTGAACGGGGACGATGCAGAGCAAAACTTGGATTCAGATGGTGGGTTGAACTCTTCATCCTCAGAGTACAGCGACTAA 5217 0.4353 MEACSEEEKKPPVGETKTKRKMKTASQLEILEKTYATEPNPSESLRAELSAKLGLSDRQLQMWFCHRRLKDRKAPAAKRPGNESPAVAVTPEADGFERKVMGDGGHSRDSISGSMPFSHMDSQRVVPRPGMAFPSIGGGLLAMGYYEPHQSKAKLKAIAFVEAQLGGPFRDDGPILGMEFDPLPPGAFGAPIGPTAMGKHWQSTRPFEAKIYERLDKGGSRTLHEYKFIPEQPTVRNETYDYERVASANHYGSLDGIPHSRTLFSSGRSLLNKNEVASYGYGYQNLMPGLNLLSQQGRQNHLLPSASGQNDNLPRRNMFVDVPVDSYIGAYPATQIDSMSTPSDQKVIHEEQNSRFQRKRKNEEARMQRELEAQEKRIRKELEKQDILRRKREEQARKEMERHERERQKEEERLLRERRREEERYQREQRRELERREKILQKESIRAEKRKQKEELRKEKEAARIKAANERAIARRMGKESIELIEDERLELMELAASEKGLSSILSLDCETLENLELFKDGRTSFPPKAVLLKRPFSIQPWLDSEDNIGNLLMVWRFLISFADVLGIWPFTLDEFLQAFHDHDPRLLGEIHIALLRCIIKDIEDVARTTGVGANHNSAVNPCGGHPQVVEGAYFWGFDIRSWQRLLNPLTWPEIMRQFALSAGFGPRLSRRINEQVYPCDNNQGIDGEDVISNLRSGAAVENAVAIMQEKGLSNQRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILETAGKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVRPAYRKDPADGDAILSAARERIRIFKNGLVDAEEPDDGERDDDSEIDMAEDPGVYDLGTETNNKEASDLVECSLNTVVKNREGSGEILWTPDGSGNVASKPDLEDTASIDESNRGEPWVEGLIEGEYSDLSVEERLNALVALIGVAIEGNSIRVVLEERLEAAIALKKQMWAEVQLDRHRIKENYLFKMQSARCVANKNEPTPSMSSMEGKQGPLLGVDDRNDKTLPTPPTQQVQLNDNQTHLQSVLPEVNIKMQDSAVPYNYSCQQFGPGAEMSRPNFKSCIGQLAEETYIYRSLPLGLDRRRNRYWQFITCASQNDPGCGRIFVEMHDGCWRLIDSEEGFDALLASLDVRGIRESHLHMMLRRIERSFKESVKRNNLRRQEGDTVNKSFQMTAEHDCCASMCSTNLDLSETSTSFVVQLGRNDSDNQDALRRYQDFEKWMLKEGINSSVLCALRAGKRRCSQFLGMCDFCHEIHLSEEIPSPSCYRTLRICKSNLSSSEHMAQYEGKLKITDDYVINVSPSYPLRLRLLKVLLSIVEVSIPREALKPIWTDNYRKSWGIKLHASSSSEELLEILTILESAIKRDYLVSNFKTTGELLGSIFSSGFQSDSVGAERIPVLPWVPHTTAAVALRLMELDISLFYSLEQKLESEKDKTNENIMKFPPKHVSAKNAIGACTAETSHLAGHSLVDLGAGFASYSRGQRYCGQDRDRTHGGRSQGRVINSRSECKKKATATSRRRLGQGLRWKGKSRGRGGNRRARQSIRSSRQKPAAKEQEVTVERNAPQGESAGIFVREGSNEAETFGCQMEIPENAASSSGRSDYEENKYNVTGDDNDYLVDNNDNGYDGGGFSGKSGNIEDINFDLDDEDGDGVGGYSGKSDDLIEGIGFDIDDEEEEDIDDDEDDEQVHVEDFINGDSDIGVNGDDAEQNLDSDGGLNSSSSEYSD 1738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0938 1738 Gene3D - 7 86 - -
Prci6g0938 1738 Pfam HB1, ASXL, restriction endonuclease HTH domain 726 793 IPR007759 GO:0006355
Prci6g0938 1738 MobiDBLite consensus disorder prediction 823 847 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1535 1557 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1602 1617 - -
Prci6g0938 1738 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1086 1158 IPR028941 -
Prci6g0938 1738 SUPERFAMILY Homeodomain-like 12 73 IPR009057 -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1497 1583 - -
Prci6g0938 1738 ProSiteProfiles DDT domain profile. 546 605 IPR018501 -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 826 842 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 335 368 - -
Prci6g0938 1738 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 6 1738 IPR044977 GO:0006357
Prci6g0938 1738 SMART HOX_1 16 78 IPR001356 GO:0003677
Prci6g0938 1738 Pfam DDT domain 548 602 IPR018501 -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1706 1738 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 97 117 - -
Prci6g0938 1738 ProSiteProfiles 'Homeobox' domain profile. 14 74 IPR001356 GO:0003677
Prci6g0938 1738 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 907 949 IPR028942 -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1724 1738 - -
Prci6g0938 1738 CDD homeodomain 17 73 IPR001356 GO:0003677
Prci6g0938 1738 SMART testlast3 546 605 IPR018501 -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 348 368 - -
Prci6g0938 1738 ProSiteProfiles HARE-type HTH domain profile. 726 795 IPR007759 GO:0006355
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1602 1630 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 394 413 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1 25 - -
Prci6g0938 1738 MobiDBLite consensus disorder prediction 1652 1676 - -
Prci6g0938 1738 Coils Coil 346 473 - -
Prci6g0938 1738 Pfam Homeodomain 17 73 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0938 Prci-Chr6 6405444 6423062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0938 14 1646 Homeobox Transcription Factor Family AT5G44180 46.972 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci6g0938 WSD 3.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0938 - - pcin:129313496 3129.73