Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0937 ATGGAGGCTTGTTCAGAAGAAGAGAAGAAGCCACCTGTGGGAGAGACTAAGACAAAGCGCAAAATGAAGACTGCTTCCCAGTTGGAGATTCTGGAGAAAACTTATGCTACGGAACCGAATCCATCCGAGTCATTGCGAGCAGAGCTATCGGCGAAATTGGGTCTTTCGGATCGTCAACTGCAAATGTGGTTTTGTCACCGTAGGTTGAAAGACAGAAAGGCACCGGCAGCGAAGAGGCCGGGAAATGAATCGCCAGCTGTAGCGGTGACTCCGGAGGCAGATGGTTTTGAGCGGAAGGTAATGGGTGATGGCGGGCATTCGCGTGATTCCATTTCTGGGTCGATGCCATTCAGTCATATGGATTCACAGCGAGTTGTCCCTCGACCTGGTATGGCATTTCCTAGTATTGGAGGGGGATTGCTAGCAATGGGTTACTATGAACCACATCAGTCCAAAGCTAAGCTGAAAGCTATTGCATTTGTGGAAGCACAGTTAGGAGGACCATTTAGAGACGACGGGCCAATTTTGGGGATGGAATTTGATCCGTTGCCACCCGGTGCGTTTGGTGCACCAATAGGTCCAACTGCAATGGGAAAGCATTGGCAATCTACTAGGCCTTTTGAGGCAAAAATTTATGAACGATTGGACAAGCAAGGCAGGCAGAATCATCTTTTACCTTCTGCTTCTGGACAGAATGATAATCTTCCACGGAGGAATATGTTTGTTGATGTGCCTGTTGACTCTTATATTGGAGCTTACCCAGCAACTCAGATTGACAGCATGTCAACACCATCTGACCAGAAGGTTATCCATGAGGAGCAAAATTCACGGTTTCAAAGGAAGCGGAAGAATGAAGAGGCTAGAATGCAGCGGGAGCTTGAGGCACAAGAGAAGAGAATCAGAAAAGAGCTTGAAAAGCAGGATATTTTAAGGCGAAAGAGAGAAGAGCAAGCAAGGAAGGAGATGGAGAGGCATGAACGTGAAAGGCAGAAGGAAGAGGAAAGGCTATTGCGTGAAAGACGGAGGGAAGAGGAGAGATACCAAAGAGAACAGAGGCGTGAACTAGAACGGAGGGAGAAGATTTTGCAGAAAGAGTCAATCAGACTCTTGCAGGCTGAGAAAAGGAAACAGAAGGAAGAATTACGCAAAGAGAAAGAGGCAGCAAGGATCAAAGCAGCCAATGAGAGAGCTATTGCTCGCAGAATGGGCAAAGAATCAATTGAACTTATTGAAGATGAGCGACTGGAATTGATGGAGCTAGCTGCATCAGAAAAGGGACTTTCTTCAATTTTGTCTCTTGACTGTGAGACTTTAGAAAATCTTGAATTATTTAAGGATGGGCGGACATCATTTCCACCTAAGGCTGTACTGCTGAAAAGACCTTTCTCAATTCAGCCTTGGTTGGATTCTGAGGACAACATAGGAAACCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTGCTGATGTTCTTGGGATTTGGCCATTCACCTTGGATGAATTTTTACAAGCTTTCCATGACCATGATCCTAGGTTGTTAGGTGAGATTCATATTGCTCTTTTGAGATGTATCATAAAAGATATTGAAGATGTTGCAAGAACTACTGGGGTAGGAGCTAATCATAACAGTGCTGTCAACCCTTGTGGGGGTCATCCGCAAGTAGTTGAAGGGGCATATTTTTGGGGGTTTGATATAAGAAGTTGGCAGCGACTCTTAAATCCCTTGACATGGCCAGAAATTATGCGACAATTTGCTTTATCAGCTGGATTTGGGCCACGATTGAGTAGAAGAATCAATGAGCAGGTGTACCCTTGTGATAACAATCAGGGTATTGACGGTGAAGATGTTATTTCCAATCTACGAAGTGGGGCTGCAGTTGAAAATGCTGTTGCTATCATGCAAGAGAAGGGATTATCTAACCAACGAAGATCTAGGCATCGCTTGACACCTGGAACTGTTAAGTTTGCAGCATTTCATGTCCTATCTCTTGAAGGAAGTAAGGGCCTTACCATATTGGAAACTGCAGGCAAGATTCAGAAATCTGGACTTCGTGATCTTACAACAAGCAAAACTCCTGAGGCTTCTATAGCTGCTGCTTTGTCCAGGGACACAAAGCTTTTTGAAAGGACTGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGATCCAGCCGATGGTGATGCAATCCTCTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAATGGACTTGTTGATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCAGAAATTGACATGGCAGAAGATCCTGGGGTTTATGATTTAGGTACTGAAACAAACAACAAGGAGGCTTCTGATTTAGTGGAATGCAGTTTGAACACTGTAGTTAAGAATAGAGAAGGCAGTGGTGAAATTTTGTGGACTCCTGATGGTAGTGGCAATGTTGCAAGTAAACCTGATTTAGAAGACACCGCCAGTATTGATGAAAGTAATCGAGGTGAACCATGGGTTGAGGGGCTTATCGAAGGAGAATACTCAGATCTTAGTGTTGAAGAGCGACTTAATGCCCTTGTTGCTCTGATTGGTGTGGCAATTGAAGGAAATTCAATCCGTGTTGTTCTTGAGGAGCGTCTAGAAGCAGCAATTGCTTTAAAGAAGCAGATGTGGGCAGAGGTGCAGCTTGATAGACACCGAATCAAAGAGAACTACCTTTTCAAGATGCAGTCTGCCCGTTGTGTGGCCAATAAGAATGAACCAACTCCTTCAATGTCATCCATGGAGGGTAAACAGGGCCCTTTGCTTGGTGTCGATGACAGGAATGACAAGACACTACCAACTCCCCCCACCCAGCAAGTACAGTTAAATGATAATCAGACCCATCTTCAGAGTGTTCTACCAGAAGTGAACATAAAAATGCAAGACTCTGCTGTCCCTTATAATTATTCTTGCCAACAATTTGGACCTGGTGCTGAAATGTCAAGACCCAATTTCAAGTCATGCATTGGTCAATTGGCTGAAGAAACTTATATTTATAGGTCATTGCCACTTGGTTTGGATCGGAGACGTAATCGATACTGGCAGTTCATTACATGTGCTTCTCAAAATGATCCAGGCTGTGGTAGGATTTTTGTGGAAATGCACGATGGTTGTTGGAGGCTAATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGCATCATTGGATGTACGTGGGATTAGGGAATCTCATTTGCACATGATGTTGCGACGTATTGAAAGGTCTTTCAAGGAATCTGTTAAAAGGAATAACTTGAGGAGGCAAGAGGGGGACACTGTTAATAAATCTTTTCAAATGACTGCTGAGCATGATTGCTGTGCTTCCATGTGCAGTACTAATTTAGATTTGTCAGAGACATCAACATCTTTTGTGGTTCAGCTTGGAAGGAATGATTCTGATAACCAAGATGCTTTGAGGAGATACCAGGACTTTGAAAAATGGATGCTTAAGGAAGGCATAAATTCCTCAGTATTATGTGCGTTGAGGGCTGGGAAGAGAAGGTGCAGTCAATTTCTGGGCATGTGTGATTTCTGCCATGAGATCCATTTATCTGAAGAAATTCCATCTCCTTCCTGCTATAGAACCCTTCGTATTTGTAAGAGCAACTTAAGCTCTTCTGAACATATGGCTCAATATGAAGGAAAATTGAAGATTACTGATGATTATGTAATTAATGTGTCCCCCTCTTATCCATTGAGACTGAGATTGCTTAAAGTGCTGTTGTCAATAGTTGAGGTTTCCATTCCTCGAGAAGCACTTAAACCTATTTGGACAGACAACTATCGGAAGTCTTGGGGTATAAAGCTGCATGCTTCATCTTCCTCTGAAGAACTTCTTGAGATATTGACTATACTGGAGAGTGCTATCAAGAGGGATTACTTGGTTTCAAACTTCAAGACTACCGGTGAGCTGTTGGGTTCTATTTTTTCTTCTGGATTTCAGAGTGATTCCGTGGGAGCTGAAAGGATTCCTGTACTGCCCTGGGTGCCTCATACAACTGCTGCTGTGGCATTAAGGCTCATGGAACTTGACATCTCCCTGTTTTATTCCTTAGAGCAGAAGCTGGAGTCTGAAAAGGACAAGACAAATGAGAATATTATGAAGTTTCCTCCGAAACATGTTTCTGCCAAGAATGCCATAGGTGCTTGTACAGCTGAGACTTCTCATCTGGCTGGGCATAGCTTGGTCGATCTTGGTGCTGGATTTGCTAGCTACAGTCGAGGACAAAGGTACTGTGGACAGGACCGTGATCGCACTCATGGAGGGAGATCGCAAGGAAGGGTCATAAATTCAAGATCTGAATGTAAAAAAAAAGCTACTGCCACTAGCCGCAGGAGACTTGGACAGGGACTAAGATGGAAAGGTAAATCACGAGGTCGTGGAGGCAATCGCCGTGCTCGTCAAAGCATCAGAAGCAGCAGGCAGAAACCAGCAGCTAAAGAGCAAGAGGTTACTGTTGAGAGGAATGCTCCCCAAGGGGAATCTGCCGGTATTTTTGTCAGGGAGGGAAGCAATGAAGCTGAAACTTTTGGATGTCAAATGGAGATTCCCGAAAATGCTGCAAGCAGTTCCGGGAGATCAGATTATGAGGAAAATAAATATAATGTGACAGGTGACGATAATGATTATCTAGTGGATAATAATGATAATGGCTACGATGGGGGCGGATTTAGTGGGAAGTCTGGGAATATAGAAGATATTAATTTTGATTTAGATGATGAAGATGGAGATGGGGTTGGTGGATATAGTGGGAAGTCTGACGATTTAATAGAAGGGATTGGTTTTGACATAGATGATGAGGAAGAAGAGGATATTGATGACGACGAGGATGATGAGCAGGTTCATGTTGAAGACTTCATAAACGGGGATTCAGATATAGGAGTGAACGGGGACGATGCAGAGCAAAACTTGGATTCAGATGGTGGGTTGAACTCTTCATCCTCAGAGTACAGCGACTAA 4992 0.4379 MEACSEEEKKPPVGETKTKRKMKTASQLEILEKTYATEPNPSESLRAELSAKLGLSDRQLQMWFCHRRLKDRKAPAAKRPGNESPAVAVTPEADGFERKVMGDGGHSRDSISGSMPFSHMDSQRVVPRPGMAFPSIGGGLLAMGYYEPHQSKAKLKAIAFVEAQLGGPFRDDGPILGMEFDPLPPGAFGAPIGPTAMGKHWQSTRPFEAKIYERLDKQGRQNHLLPSASGQNDNLPRRNMFVDVPVDSYIGAYPATQIDSMSTPSDQKVIHEEQNSRFQRKRKNEEARMQRELEAQEKRIRKELEKQDILRRKREEQARKEMERHERERQKEEERLLRERRREEERYQREQRRELERREKILQKESIRLLQAEKRKQKEELRKEKEAARIKAANERAIARRMGKESIELIEDERLELMELAASEKGLSSILSLDCETLENLELFKDGRTSFPPKAVLLKRPFSIQPWLDSEDNIGNLLMVWRFLISFADVLGIWPFTLDEFLQAFHDHDPRLLGEIHIALLRCIIKDIEDVARTTGVGANHNSAVNPCGGHPQVVEGAYFWGFDIRSWQRLLNPLTWPEIMRQFALSAGFGPRLSRRINEQVYPCDNNQGIDGEDVISNLRSGAAVENAVAIMQEKGLSNQRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILETAGKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVRPAYRKDPADGDAILSAARERIRIFKNGLVDAEEPDDGERDDDSEIDMAEDPGVYDLGTETNNKEASDLVECSLNTVVKNREGSGEILWTPDGSGNVASKPDLEDTASIDESNRGEPWVEGLIEGEYSDLSVEERLNALVALIGVAIEGNSIRVVLEERLEAAIALKKQMWAEVQLDRHRIKENYLFKMQSARCVANKNEPTPSMSSMEGKQGPLLGVDDRNDKTLPTPPTQQVQLNDNQTHLQSVLPEVNIKMQDSAVPYNYSCQQFGPGAEMSRPNFKSCIGQLAEETYIYRSLPLGLDRRRNRYWQFITCASQNDPGCGRIFVEMHDGCWRLIDSEEGFDALLASLDVRGIRESHLHMMLRRIERSFKESVKRNNLRRQEGDTVNKSFQMTAEHDCCASMCSTNLDLSETSTSFVVQLGRNDSDNQDALRRYQDFEKWMLKEGINSSVLCALRAGKRRCSQFLGMCDFCHEIHLSEEIPSPSCYRTLRICKSNLSSSEHMAQYEGKLKITDDYVINVSPSYPLRLRLLKVLLSIVEVSIPREALKPIWTDNYRKSWGIKLHASSSSEELLEILTILESAIKRDYLVSNFKTTGELLGSIFSSGFQSDSVGAERIPVLPWVPHTTAAVALRLMELDISLFYSLEQKLESEKDKTNENIMKFPPKHVSAKNAIGACTAETSHLAGHSLVDLGAGFASYSRGQRYCGQDRDRTHGGRSQGRVINSRSECKKKATATSRRRLGQGLRWKGKSRGRGGNRRARQSIRSSRQKPAAKEQEVTVERNAPQGESAGIFVREGSNEAETFGCQMEIPENAASSSGRSDYEENKYNVTGDDNDYLVDNNDNGYDGGGFSGKSGNIEDINFDLDDEDGDGVGGYSGKSDDLIEGIGFDIDDEEEEDIDDDEDDEQVHVEDFINGDSDIGVNGDDAEQNLDSDGGLNSSSSEYSD 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0937 1663 Coils Coil 268 353 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 257 290 - -
Prci6g0937 1663 Pfam DDT domain 473 527 IPR018501 -
Prci6g0937 1663 SMART testlast3 471 530 IPR018501 -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1649 1663 - -
Prci6g0937 1663 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 832 874 IPR028942 -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1631 1663 - -
Prci6g0937 1663 Pfam Homeodomain 17 73 IPR001356 GO:0003677
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1460 1482 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 748 772 - -
Prci6g0937 1663 SUPERFAMILY Homeodomain-like 12 73 IPR009057 -
Prci6g0937 1663 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 6 218 IPR044977 GO:0006357
Prci6g0937 1663 Coils Coil 362 398 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1422 1508 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1527 1542 - -
Prci6g0937 1663 ProSiteProfiles DDT domain profile. 471 530 IPR018501 -
Prci6g0937 1663 Gene3D - 7 86 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 316 335 - -
Prci6g0937 1663 Pfam HB1, ASXL, restriction endonuclease HTH domain 651 718 IPR007759 GO:0006355
Prci6g0937 1663 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1011 1083 IPR028941 -
Prci6g0937 1663 SMART HOX_1 16 78 IPR001356 GO:0003677
Prci6g0937 1663 MobiDBLite consensus disorder prediction 97 117 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 751 767 - -
Prci6g0937 1663 ProSiteProfiles 'Homeobox' domain profile. 14 74 IPR001356 GO:0003677
Prci6g0937 1663 MobiDBLite consensus disorder prediction 270 290 - -
Prci6g0937 1663 CDD homeodomain 17 73 IPR001356 GO:0003677
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1577 1601 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1 25 - -
Prci6g0937 1663 MobiDBLite consensus disorder prediction 1527 1555 - -
Prci6g0937 1663 ProSiteProfiles HARE-type HTH domain profile. 651 720 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0937 Prci-Chr6 6405444 6423062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0937 14 1378 Homeobox Transcription Factor Family AT5G44180 49.863 0.0 1252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Prci6g0937 WSD 3.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0937 - - pcin:129313496 2537.68