Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0934 ATGCTTGCGGTGTCACCTTTGAGACGAACCCAAGATGAAATTCAAAGCCAAGAAGAGACGAGCGGCTTCTCATCAATCGTCGGTGGCGGCGACGACTTTGGAGAATTTTCCGATGGGAATTTATTGGAGAGCATCAACTTCGACCATCTCTTTGTCGGCATCAACGTCGCCGGAGATGAGTTGCCGGATTTGGAGATGGGCCCGGAGATCCTCTCCGAGTTCTCCATGGAGTCGTCGGAGAATATGAACTCCTCCTCGCTGTCCGTGGAAAATAACGACAATAATAGAGCTGACGATCGTCACCTGATCAACAGTATTACAGCTGGGAAGGAAGAAGACGACGAAGATTGCAATAACAAAGTTTGTTCAGCTTCGGCTTCAAATTCCGGGACAAGTCCAGCGGAAGAAGAGACAGTGATCAACAAAACAGATGAATCTCCGACGACGACGACGAAGTTGAAGCCATCGCCGAAGGAAGGTGAGCAAAAGGGAAGAAAATCATCAGCCGAATCCAAAAATTCCCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACGCCAGAATTACACAGAAGATTCGTACAAGCAGTGGAGCAGCTCGGAGTGGACAAGGCAGTCCCTTCCAAAATCTTAGAGATTATGGGAATTGCATGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCAGAAGCGGCGAGGTGGAGTAAGAGGAAAGAGATGTATGGAGGAGGAGTAGGAGGGCGGAGAGAGGCAAGGTCATGGGCGCCGTCGCCGCCGCCGACGTTGGGTTTTCCTCAAATGGTTCCTCCAACGACGGCGTCGACGATGAACCATTTTAGACCATTACATGTATGGGGCCATCCCACCGTGGACCAGTACTTCACCTTCATCCCTCGCTGGCCGAAACAGCATCATCTTCCACATCCAATGTCGACGCCGCCGCCCCCGGCCTGGCTATACCCAGCCGCTTCGCCACCTCCAGACCCTTCATTCTGGCACCCTCTCCATCAGCAGGCTGATCCGAAGGCATTCGCCCCAGGAATAGGAACATATTGTTTTCCAGCACCAACAAATCTATGTGTGACGGGATGTGGATATCCACCTGTCCCTGGCATCCCACCACATGGCATGTTCACGGCAGATCCCGACCTCAGATCTCCAACCGGGCAGACCGGCCCATGGCCCGTCTTCGACTTCCACCCGTCGAAGGAAAGCATAGATGCAGCTCTTGGAGATGTTTTATCAAAACCATGGCTGCCACTTCCTCTGGGCCTTAAGGCGCCGGCGCTTGATAGTGTGTTGAGTGAATTGCAGAGGCAAGGAATTCCCAATATTCCTCCCTCTTGTGCTTGA 1392 0.5216 MLAVSPLRRTQDEIQSQEETSGFSSIVGGGDDFGEFSDGNLLESINFDHLFVGINVAGDELPDLEMGPEILSEFSMESSENMNSSSLSVENNDNNRADDRHLINSITAGKEEDDEDCNNKVCSASASNSGTSPAEEETVINKTDESPTTTTKLKPSPKEGEQKGRKSSAESKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGIACLTRHNIASHLQKYRSHRKHLLAREAEAARWSKRKEMYGGGVGGRREARSWAPSPPPTLGFPQMVPPTTASTMNHFRPLHVWGHPTVDQYFTFIPRWPKQHHLPHPMSTPPPPAWLYPAASPPPDPSFWHPLHQQADPKAFAPGIGTYCFPAPTNLCVTGCGYPPVPGIPPHGMFTADPDLRSPTGQTGPWPVFDFHPSKESIDAALGDVLSKPWLPLPLGLKAPALDSVLSELQRQGIPNIPPSCA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0934 463 MobiDBLite consensus disorder prediction 120 155 - -
Prci6g0934 463 MobiDBLite consensus disorder prediction 93 119 - -
Prci6g0934 463 NCBIfam myb-like DNA-binding domain, SHAQKYF class 179 233 IPR006447 GO:0003677
Prci6g0934 463 MobiDBLite consensus disorder prediction 156 181 - -
Prci6g0934 463 MobiDBLite consensus disorder prediction 1 29 - -
Prci6g0934 463 MobiDBLite consensus disorder prediction 254 276 - -
Prci6g0934 463 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 462 IPR044825 GO:0003700|GO:0045893
Prci6g0934 463 SUPERFAMILY Homeodomain-like 177 236 IPR009057 -
Prci6g0934 463 Pfam Myb-like DNA-binding domain 182 231 IPR001005 -
Prci6g0934 463 MobiDBLite consensus disorder prediction 76 92 - -
Prci6g0934 463 FunFam Two-component response regulator 175 238 - -
Prci6g0934 463 MobiDBLite consensus disorder prediction 76 181 - -
Prci6g0934 463 Coils Coil 463 463 - -
Prci6g0934 463 Gene3D - 176 237 - -
Prci6g0934 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 176 235 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0934 Prci-Chr6 6380558 6384099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0934 34 352 G2-like Transcription Factor Family AT5G44190 39.394 3.39e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci6g0934 Myb_DNA-binding 4e-08 CL0123