Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0933 ATGCTTGCGGTGTCACCTTTGAGACGAACCCAAGATGAAATTCAAAGCCAAGAAGAGACGAGCGGCTTCTCATCAATCGTCGGTGGCGGCGACGACTTTGGAGAATTTTCCGATGGGAATTTATTGGAGAGCATCAACTTCGACCATCTCTTTGTCGGCATCAACGTCGCCGGAGATGAGTTGCCGGATTTGGAGATGGGCCCGGAGATCCTCTCCGAGTTCTCCATGGAGTCGTCGGAGAATATGAACTCCTCCTCGCTGTCCGTGGAAAATAACGACAATAATAGAGCTGACGATCGTCACCTGATCAACAGTATTACAGCTGGGAAGGAAGAAGACGACGAAGATTGCAATAACAAAGTTTGTTCAGCTTCGGCTTCAAATTCCGGGACAAGTCCAGCGGAAGAAGAGACAGTGATCAACAAAACAGATGAATCTCCGACGACGACGACGAAGTTGAAGCCATCGCCGAAGGAAGGTGAGCAAAAGGGAAGAAAATCATCAGCCGAATCCAAAAATTCCCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACGCCAGAATTACACAGAAGATTCGTACAAGCAGTGGAGCAGCTCGGAGTGGACAAGGCAGTCCCTTCCAAAATCTTAGAGATTATGGGAATTGCATGTCTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCAGAAGCGGCGAGGTGGAGTAAGAGGAAAGAGATGTATGGAGGAGGAGTAGGAGGGCGGAGAGAGGCAAGGTCATGGGCGCCGTCGCCGCCGCCGACGTTGGGTTTTCCTCAAATGGTTCCTCCAACGACGGCGTCGACGATGAACCATTTTAGACCATTACATGTATGGGGCCATCCCACCGTGGACCAGTACTTCACCTTCATCCCTCGCTGGCCGAAACAGCATCATCTTCCACATCCAATGTCGACGCCGCCGCCCCCGGCCTGGCTATACCCAGCCGCTTCGCCACCTCCAGACCCTTCATTCTGGCACCCTCTCCATCAGCAGGGATGTGGATATCCACCTGTCCCTGGCATCCCACCACATGGCATGTTCACGGCAGATCCCGACCTCAGATCTCCAACCGGGCAGACCGGCCCATGGCCCGTCTTCGACTTCCACCCGTCGAAGGAAAGCATAGATGCAGCTCTTGGAGATGTTTTATCAAAACCATGGCTGCCACTTCCTCTGGGCCTTAAGGCGCCGGCGCTTGATAGTGTGTTGAGTGAATTGCAGAGGCAAGGAATTCCCAATATTCCTCCCTCTTGTGCTTGA 1320 0.5242 MLAVSPLRRTQDEIQSQEETSGFSSIVGGGDDFGEFSDGNLLESINFDHLFVGINVAGDELPDLEMGPEILSEFSMESSENMNSSSLSVENNDNNRADDRHLINSITAGKEEDDEDCNNKVCSASASNSGTSPAEEETVINKTDESPTTTTKLKPSPKEGEQKGRKSSAESKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGIACLTRHNIASHLQKYRSHRKHLLAREAEAARWSKRKEMYGGGVGGRREARSWAPSPPPTLGFPQMVPPTTASTMNHFRPLHVWGHPTVDQYFTFIPRWPKQHHLPHPMSTPPPPAWLYPAASPPPDPSFWHPLHQQGCGYPPVPGIPPHGMFTADPDLRSPTGQTGPWPVFDFHPSKESIDAALGDVLSKPWLPLPLGLKAPALDSVLSELQRQGIPNIPPSCA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0933 439 MobiDBLite consensus disorder prediction 120 155 - -
Prci6g0933 439 MobiDBLite consensus disorder prediction 93 119 - -
Prci6g0933 439 MobiDBLite consensus disorder prediction 156 181 - -
Prci6g0933 439 Gene3D - 176 237 - -
Prci6g0933 439 MobiDBLite consensus disorder prediction 1 29 - -
Prci6g0933 439 MobiDBLite consensus disorder prediction 254 276 - -
Prci6g0933 439 SUPERFAMILY Homeodomain-like 177 236 IPR009057 -
Prci6g0933 439 FunFam Two-component response regulator 175 238 - -
Prci6g0933 439 MobiDBLite consensus disorder prediction 76 92 - -
Prci6g0933 439 NCBIfam myb-like DNA-binding domain, SHAQKYF class 179 233 IPR006447 GO:0003677
Prci6g0933 439 MobiDBLite consensus disorder prediction 76 181 - -
Prci6g0933 439 Pfam Myb-like DNA-binding domain 182 231 IPR001005 -
Prci6g0933 439 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 438 IPR044825 GO:0003700|GO:0045893
Prci6g0933 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 176 235 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0933 Prci-Chr6 6380558 6384099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0933 34 390 G2-like Transcription Factor Family AT5G44190 38.378 3.58e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci6g0933 Myb_DNA-binding 3.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0933 - - pcin:129314514 846.269