Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci6g0919 | ATGCGAAACACAACAATGGCTGTGAAGGAGAAGCTCGGTATCAAGCATAGCAAGCCCAACAATGCCAAGGAGGTTCACTACAGGGGCGTTCGCAAGAGGCCGTGGGGCCGTTACGCCGCCGAAATACGAGATCCCGGCAAGAAGAGTCGTGTCTGGCTGGGGACGTTCGACACGGCGGAGGAGGCCGCAAGAGCCTACGACGCCGCCGCCCGGCAATTCCGTGGCCCCAAGGCTAAGACCAACTTTCCTCTGCCCAGTGAAAGCGGTCTCAACGGAAATAACCAGAGCCCTAGCGAGACTAGCACCGTGGAGTCCTCCAGCCGAGAAGGCTCAGAGCGTGATATAACGCGCCGCTGCGATGTCGGCGTTGTCGTGGATCGGTTCCCGTTCCTTCCGATTCAGCCGCACCACATGGCGTTCGGTTGTGGAGGTGGCGGCATGGCGGGTTTAGTACCAGGTATGCGTCCGGTTTTCTATTTTGAACCGGCTGCTGGTGGTAGGGCTGAGTTTGTGGGTCAGCCATATCCGTTGCCGGTCGATGTTAAGACAAAAATGGGAAGTGCGGCTTCAAGCGAGTCCGATTCGTCCTCCGTCATTGATGGTCAGCCTAAGAAAGCTATCAATCTTGATCTTAACCTGGCTCCTCCATCGGACGATTGA | 660 | 0.5697 | MRNTTMAVKEKLGIKHSKPNNAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKAKTNFPLPSESGLNGNNQSPSETSTVESSSREGSERDITRRCDVGVVVDRFPFLPIQPHHMAFGCGGGGMAGLVPGMRPVFYFEPAAGGRAEFVGQPYPLPVDVKTKMGSAASSESDSSSVIDGQPKKAINLDLNLAPPSDD | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci6g0919 | 219 | MobiDBLite | consensus disorder prediction | 9 | 23 | - | - | |
Prci6g0919 | 219 | MobiDBLite | consensus disorder prediction | 186 | 202 | - | - | |
Prci6g0919 | 219 | FunFam | Ethylene-responsive transcription factor 2 | 25 | 84 | - | - | |
Prci6g0919 | 219 | SMART | rav1_2 | 26 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Prci6g0919 | 219 | MobiDBLite | consensus disorder prediction | 76 | 114 | - | - | |
Prci6g0919 | 219 | Gene3D | AP2/ERF domain | 25 | 84 | IPR036955 | GO:0003700|GO:0006355 | |
Prci6g0919 | 219 | Pfam | AP2 domain | 26 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Prci6g0919 | 219 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 20 | 199 | - | - | |
Prci6g0919 | 219 | ProSiteProfiles | AP2/ERF domain profile. | 26 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Prci6g0919 | 219 | SUPERFAMILY | DNA-binding domain | 26 | 84 | IPR016177 | GO:0003677 | |
Prci6g0919 | 219 | MobiDBLite | consensus disorder prediction | 185 | 219 | - | - | |
Prci6g0919 | 219 | MobiDBLite | consensus disorder prediction | 84 | 105 | - | - | |
Prci6g0919 | 219 | PRINTS | Ethylene responsive element binding protein signature | 49 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
Prci6g0919 | 219 | PRINTS | Ethylene responsive element binding protein signature | 27 | 38 | IPR001471 | GO:0003700|GO:0006355 | |
Prci6g0919 | 219 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Prci6g0919 | 219 | CDD | AP2 | 26 | 83 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci6g0919 | Prci-Chr6 | 6274591 | 6275660 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci6g0919 | 23 | 219 | AP2-EREBP Transcription Factor Family | AT5G44210 | 48.780 | 5.83e-49 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Prci6g0919 | AP2 | 9.1e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci6g0919 | K09286 | - | qsa:O6P43_000758 | 252.677 |