Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0919 ATGCGAAACACAACAATGGCTGTGAAGGAGAAGCTCGGTATCAAGCATAGCAAGCCCAACAATGCCAAGGAGGTTCACTACAGGGGCGTTCGCAAGAGGCCGTGGGGCCGTTACGCCGCCGAAATACGAGATCCCGGCAAGAAGAGTCGTGTCTGGCTGGGGACGTTCGACACGGCGGAGGAGGCCGCAAGAGCCTACGACGCCGCCGCCCGGCAATTCCGTGGCCCCAAGGCTAAGACCAACTTTCCTCTGCCCAGTGAAAGCGGTCTCAACGGAAATAACCAGAGCCCTAGCGAGACTAGCACCGTGGAGTCCTCCAGCCGAGAAGGCTCAGAGCGTGATATAACGCGCCGCTGCGATGTCGGCGTTGTCGTGGATCGGTTCCCGTTCCTTCCGATTCAGCCGCACCACATGGCGTTCGGTTGTGGAGGTGGCGGCATGGCGGGTTTAGTACCAGGTATGCGTCCGGTTTTCTATTTTGAACCGGCTGCTGGTGGTAGGGCTGAGTTTGTGGGTCAGCCATATCCGTTGCCGGTCGATGTTAAGACAAAAATGGGAAGTGCGGCTTCAAGCGAGTCCGATTCGTCCTCCGTCATTGATGGTCAGCCTAAGAAAGCTATCAATCTTGATCTTAACCTGGCTCCTCCATCGGACGATTGA 660 0.5697 MRNTTMAVKEKLGIKHSKPNNAKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKAKTNFPLPSESGLNGNNQSPSETSTVESSSREGSERDITRRCDVGVVVDRFPFLPIQPHHMAFGCGGGGMAGLVPGMRPVFYFEPAAGGRAEFVGQPYPLPVDVKTKMGSAASSESDSSSVIDGQPKKAINLDLNLAPPSDD 219
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0919 219 MobiDBLite consensus disorder prediction 9 23 - -
Prci6g0919 219 MobiDBLite consensus disorder prediction 186 202 - -
Prci6g0919 219 FunFam Ethylene-responsive transcription factor 2 25 84 - -
Prci6g0919 219 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Prci6g0919 219 MobiDBLite consensus disorder prediction 76 114 - -
Prci6g0919 219 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Prci6g0919 219 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Prci6g0919 219 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 199 - -
Prci6g0919 219 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Prci6g0919 219 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Prci6g0919 219 MobiDBLite consensus disorder prediction 185 219 - -
Prci6g0919 219 MobiDBLite consensus disorder prediction 84 105 - -
Prci6g0919 219 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Prci6g0919 219 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Prci6g0919 219 MobiDBLite consensus disorder prediction 1 23 - -
Prci6g0919 219 CDD AP2 26 83 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci6g0919 Prci-Chr6 6274591 6275660 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0919 23 219 AP2-EREBP Transcription Factor Family AT5G44210 48.780 5.83e-49 157
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci6g0919 AP2 9.1e-16 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0919 K09286 - qsa:O6P43_000758 252.677