Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0915 ATGAGCAGTGCTGAATGCGCAGAGAACAAGTTCTACGATACCCATCAGCTCCTCTTCCCAAAGAAATCAATGATCAGTAGGGACATTGAAATCATGCCACCAAGGAAGCTCCTCACTCGCCTTGGCGGCGCCAAAACTGTTATGCACGACGTCGCCGATATTTTCACTGACTCGCCACGGTTTTCTTCTTCTGATGAGATCCTTCTGCGGAAATTCCTCCCCCACAACAATATCGTGGATGAATCCGACGACGACGATACCGATCCGTACTCCTCCGAACACTTCCGAATGTACGAGTTCAAGGTCCGCCGATGCAGTCGCAGCCGGAGCCACGACTGGACCGACTGTCCCTTCGTTCATCCCGGTGAAAAGGCTCGCCGGCGCGATCCCAGAAGGTACCACTACTCCGGCACTATCTGCTCGGAGTACCGCCGCAGCGGCTCATGCAGACGCGGCGATACTTGCGAGTTTGCACACGGGGTGTTTGAATGTTGGCTTCACCCAGCAAGGTACAGAACGGAGGCTTGTAAGGATGGTAAGAATTGTAAGCGGAAGGTGTGCTTCTTCGCTCACACCCCTCGCCAACTGAGAATTTTGCCGGCGAATTGTTCTTCTTCACTGGATCAAATCTCAGACAAGAACAAGAAATTCTTAAACCCCTCATTGGGATCAAACAATAATTGCTGTATGTTCTGTCATCGCTCTGCTCATTCTTCTCCAACTTCAACTCTCATTGGGATGTCCCATTTTTCACCGCCGCCGTCGCCCTCTATCTCACCGACCAAAACAGGAACCTCTGCGAATGGCTTGTCGCAAATTTCAAGACCCCAGCAAGTCTATCTGCCTCGAGAATTTCTTCCACTGGAAAAATCGAGAGCAGAATCGTTGATGATGATAATGGGTCTTCCTGTGCAACTCCAGATCTCGGTTGGGTCAATGACCTGCTCATATAGATGCATGGTGACTATTATTTCAGGAAGATAA 984 0.502 MSSAECAENKFYDTHQLLFPKKSMISRDIEIMPPRKLLTRLGGAKTVMHDVADIFTDSPRFSSSDEILLRKFLPHNNIVDESDDDDTDPYSSEHFRMYEFKVRRCSRSRSHDWTDCPFVHPGEKARRRDPRRYHYSGTICSEYRRSGSCRRGDTCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHTPRQLRILPANCSSSLDQISDKNKKFLNPSLGSNNNCCMFCHRSAHSSPTSTLIGMSHFSPPPSPSISPTKTGTSANGLSQISRPQQVYLPREFLPLEKSRAESLMMIMGLPVQLQISVGSMTCSYRCMVTIISGR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0915 327 SMART c3hfinal6 134 161 IPR000571 GO:0046872
Prci6g0915 327 SMART c3hfinal6 170 193 IPR000571 GO:0046872
Prci6g0915 327 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 138 160 IPR000571 GO:0046872
Prci6g0915 327 SUPERFAMILY CCCH zinc finger 133 164 IPR036855 GO:0046872
Prci6g0915 327 Gene3D - 128 208 - -
Prci6g0915 327 MobiDBLite consensus disorder prediction 251 273 - -
Prci6g0915 327 ProSiteProfiles Zinc finger C3H1-type profile. 135 162 IPR000571 GO:0046872
Prci6g0915 327 PANTHER UNKEMPT FAMILY MEMBER 67 265 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0915 Prci-Chr6 6234506 6236122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0915 90 207 C2H2 Transcription Factor Family AT5G12850 61.017 3.91e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci6g0915 zf-CCCH 2.6e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0915 K23047 - qsa:O6P43_028831 359.377