Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0896 ATGTTCTTCCTTTTCATGGAAGAGCATTTCAAAATGATCTCACTTCCTTTCCTCTACCTTATCTCCCTTCTTCACTTGACAGCCACACCAAGCTCAGTATCTGCGACTGAATTTGTCTACAACACAAACTTCAAATCTTCTAATATCTTTCTGTGTGGAAACTCTACTATTCAGTCATCCATTCTGGTTCTCACCAATCGAAGTTTCTTCTCCATTAGCCGAGCTTTTTACCCTTACAAAATACCAACTAAAGCAGCTAACTCTTCTACCCCTTTTCCCTTTGCAACTTCCTTCATTTTCTCTATTGCTCCCATTAAGCATTTTCTCACCGGCCATGGCTTTGCTTTCATATTCTCACCTACTAGGGGCTTAAAAGGCACGACCTCGTCTCAGTACATTGGTTTTTTGAATTTCACTAATCAAGGTAATCCTCAAAACCATGCTTTTGGTGTTGAGTTTGATGTCAGAAAAAATGTAGAATTCAATGACATAAACGACAATCATGTCGGTATAGACTTGAATTCCCTTTCTTCCTTGACTTCACATGATGCTGGTTTTTGGGGTGGGAAAAATGATAAGGAATTTAAGCGGTTGAAGTTGAATAATGGAGCAAATTACCAGGTTTGGATTGAGTTTATAGATTCACAGCTTAATGTCACAATGGCTCAAGCAGGAAGAAAAAGACCCCAAAAACCTCTGATTAATATGAATGTTAATCTTTCAGAGGTTTTTCTAGATGAAATGTATGTTGGGTTCTGTGCATCGACAGGGCTATTGATGGACACTACTAGAATCATGGCTTGGAGTTATAGTAATTCAAATTTTTCAATAGGTGATGCTTTGCTCACAACCGATCTGCCTTCATTTGTGCATCAAAAAGGGTTTTTTTCTGGATCAAGTGTTCCTGTTATAGGCTTCACTATTGTCTGCATAATACTCACAGGCTGTGGGTCTCTGGGGTGCTTCATTTTATGGAGTTGGATTGGCAAATCAGAGGAAGATTTAGAGGAATGGGAGTTGCAGTATTGGCCCCATAGGATTGATTACCAAGAGATTGTTGCAGCAACAAGTGGGTTCTCGGAAGAGAAAGTGATAGGAATAGGAGGGAATGGAAAAGTATATAAAGGGGTATTGCAGGGAATAGGGGTTGCAGTAAAAAGAATCTCTCATGAAACAGAATCAGGAATAAGAGAATTCCTGGCTGAAATTTCAAGCTTAGGCAGACTGAAACACAGAAATCTGGTTAACTTCAGGGGTTGGTGTAAAAGAGAGAGGGGAAGTTTTATATTAGTCTATGATTACATGGAGAATGGAAGTCTAGACAAATGGATCTTTGAAAGTGAAGGAGATAGAAAGATGCTGACTTGGGAAGAGAGGATTCAAGTTCTAAAGAATGTAGCCTCTGGGATCCTGTACTTGCATGAGGGTTGGGAAGTTAAGGTGTTGCATAGAGACATCAAATCCAGCAATGTTCTGCTTGACAAAGATATGAATGCAAGGTTGGGAGATTTTGGATTGGCTCGCATGCATGATCATCATGGGCAAATAGCAGCCACCACAAGAGTGATCGGAACTGTAGGGTACATAGCCCCAGAAGTGGTCAAGTCAGGAAGAGCATCAACTCAATCTGATGTTTTTGGTTTTGGAATATTGGTTTTAGAAGTGGTTTGTGGGAGAAGACCAATTGAAGAAGGTAAAGCAGGGTTGATTGAGTGGCTAATGTCCCTAATGGAGATTGATGAGTTATACTGTGCTCTTGATGAGAGGTTGAAGGCCCAAGGAGGATGTGTCATTGAGGAAGTGGAGAGAATGCTTCGTTTGGGTTTGCTTTGTGCAAATTCTGACCCCAATGTCAGGCCTACCATGAGGCAAGTGGTTAATTTGCTGGAAGGCGAATTTGAAGGCAATGAGACAGAACAGAACAGTAAGGGAGAGAATTTGCTTGAGAAAATAAAATCAGCAGCAACGTGGTCTGATAATGCTCTTGCTTCTTCTAACATAAGACACCCAACATTTGCCGACATCATGTTCAGTTCTAATTCTAAAACGTCTGGAAGTAACTCATATGCCATCCCAGATTCAGAGATCATCCTAGAAGAAGGGAGGTAG 2109 0.4068 MFFLFMEEHFKMISLPFLYLISLLHLTATPSSVSATEFVYNTNFKSSNIFLCGNSTIQSSILVLTNRSFFSISRAFYPYKIPTKAANSSTPFPFATSFIFSIAPIKHFLTGHGFAFIFSPTRGLKGTTSSQYIGFLNFTNQGNPQNHAFGVEFDVRKNVEFNDINDNHVGIDLNSLSSLTSHDAGFWGGKNDKEFKRLKLNNGANYQVWIEFIDSQLNVTMAQAGRKRPQKPLINMNVNLSEVFLDEMYVGFCASTGLLMDTTRIMAWSYSNSNFSIGDALLTTDLPSFVHQKGFFSGSSVPVIGFTIVCIILTGCGSLGCFILWSWIGKSEEDLEEWELQYWPHRIDYQEIVAATSGFSEEKVIGIGGNGKVYKGVLQGIGVAVKRISHETESGIREFLAEISSLGRLKHRNLVNFRGWCKRERGSFILVYDYMENGSLDKWIFESEGDRKMLTWEERIQVLKNVASGILYLHEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARMHDHHGQIAATTRVIGTVGYIAPEVVKSGRASTQSDVFGFGILVLEVVCGRRPIEEGKAGLIEWLMSLMEIDELYCALDERLKAQGGCVIEEVERMLRLGLLCANSDPNVRPTMRQVVNLLEGEFEGNETEQNSKGENLLEKIKSAATWSDNALASSNIRHPTFADIMFSSNSKTSGSNSYAIPDSEIILEEGR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0896 702 PANTHER - 53 633 - -
Prci6g0896 702 Gene3D Phosphorylase Kinase; domain 1 345 434 - -
Prci6g0896 702 CDD lectin_legume_LecRK_Arcelin_ConA 36 273 IPR001220 GO:0030246
Prci6g0896 702 FunFam L-type lectin-domain containing receptor kinase S.4 435 642 - -
Prci6g0896 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 273 IPR013320 -
Prci6g0896 702 Gene3D - 34 277 - -
Prci6g0896 702 SUPERFAMILY Protein kinase-like (PK-like) 336 629 IPR011009 -
Prci6g0896 702 FunFam L-type lectin-domain containing receptor kinase S.4 34 278 - -
Prci6g0896 702 SMART serkin_6 359 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0896 702 CDD STKc_IRAK 365 631 - -
Prci6g0896 702 ProSitePatterns Protein kinases ATP-binding region signature. 365 386 IPR017441 GO:0005524
Prci6g0896 702 ProSiteProfiles Protein kinase domain profile. 359 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0896 702 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 326 434 - -
Prci6g0896 702 Gene3D Transferase(Phosphotransferase) domain 1 435 656 - -
Prci6g0896 702 Pfam Legume lectin domain 36 274 IPR001220 GO:0030246
Prci6g0896 702 Pfam Protein kinase domain 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0896 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0896 Prci-Chr6 6090828 6093348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0896 30 578 Receptor kinase-like Gene Family AT4G04960 57.477 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci6g0896 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0896 - - gmx:100804553 919.457