Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0895 ATGGGCTGCATCAGTTCCAAGACATCAGCCGTGGAAGACGGCCGAGAGGATTTGACAAAGAAATCTTTATCTAGCAAGAGAGGGTCAGAGCTACGTGTTTCACGATTGAATTCCTCTAAAAGAAACGAGGGGGTTTGGGCAGCAGATAAGTTGGAAGGAAGTGATGTGAAGATTTCATTGATTGACAAGAAAACCAATGGCCCATTTCAGTTGTATGATGATCAAACGGGGAATAAGGAAATAGAGAAGCCTGAATTAACTATCCTTAACAACCCTGGTCTTGGAAAGGTCCCAAAGGCTGCAGAAGGAGAGCAAGTTGCAGCAGGATGGCCGAGTTGGCTTTCTTCTGTGGCTGGTGAAGCTATCAAGGGATGGATACCTCGAAGTGCCAATACTTTTGAGAGGTTAAATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAAGCACGTGATGTGACTCACCAAAAGATTGTTGCTTTGAAGAGAGTTCGGTTTGATAACCTTGATCCTGAGAGTGTAAAGTTTATGGCAAGGGAAATCCTCCTTCTGCGTAGACTTGACCATCCAAATATTATCAAGTTGGAAGGCTTGATAACATCTCAGACCTCTCGCAGCTTGTACCTCATTTTTGAGTATATGGAGCACGATCTTTCTGGACTAGCATCACGTCCTGGCATCAAGTTTTCTGAACCACAGGTTAAGTGCTACATGCAACAACTTCTTCGTGGGTTGGATCATTGTCATAGTCGGGGCGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAACAATGGCATCTTAAAAATTGCAGATTTTGGTTTGGCAAGTTTCTTTAACCCCAATCATAGTGTTCCATTGACCAGTCGTGTAGTCACTCTCTGGTATAGACCACCAGAACTTTTACTCGGAGCATCTCATTATGGAGTCGCGGTAGATTTATGGAGCACTGGTTGCATACTTGGGGAACTGTTTACTGGCAGGCCTATATTGCCAGGAAAAACAGAGGTTGAGCAACTGCACAGGATTTTCAAGCTTTGTGGATCACCATCTGAGGACTATTGGCTAAAACAGCGATTGCCACATGCTGCAGTATTCAAGCCCCCGCACCGATACAGACGAAGTATTACAGAAACATTTAAAGAATATCCATCTGCTTCAGTGAGGCTTATTGAGACACTACTTTCTATAGATCCCGCACAACGAGGGACAGCAGAAAGTGCTCTGAAAAGTGAGTTCTTCTCTACAGAGCCCCTTGCTTGTGATCCATCAAGTTTACCAAAGTATCCTCCCAGCAAAGAGATTGATTCTAAATTACGGGATGAAGAAACCAGAAGGCAAGGAGCTATGCCGAAAGTTGGCTCAGGAGTTAGACAAGAAAAGGAACGTGGGGTAACTATTCCATCAAAGCACAATGTTGATCCACGCATATCAACACAGCAAGGACATCATTCCAATTCAAAGAGCCGAAGTGAAGTGTTTAATAAAACCCACAGAGAACCTGTTTCTGGATTTTTGGTTTATCCCTCACAAAAGCAGTCACATGAGAAAGAGATGGAAAATAATTTCAGTGGGAATCTTAATAAGAGGCCTTCACATTCAGGTCCATTGGTTCCGGGTATTCAATGGGCAAGGGTTGGAAAGGAGGTTGATGAAGGGCCTCTGGGTTCAAACAGAATCAACTTGTCAAAAGTATCTGGCTTAGTTGCCTCGAGGACTTCATCATCTGAAGATCAGGAGGAAAAACCAATTTCATTGCTGCCTAGGAAAACAATTGAAGTTAAAAAATCTGTGGAGTCAACCAATGGATCAGATTCAAGAAGGCATGATAGGAAACGCCAGTCCCCACGAATTGTGGATCTCAGTCAGATAGAAAATGCAAGAGGCTCCACTCAAGAATTAACTCCGGGAGGCCGAGGATACATGGAAAACAAGATCTATCTCTCCGGTCCACTACTAGCTTCTTCAAACATGGATCAGATGCTTAAAGATCATGATCGAAAGATCCAAGAATTTTCAAGACGCTCACGAATTGACAAATCAAGAGGCAGGAAAATTCGTGCGCAGAGAAAGTAG 2085 0.4341 MGCISSKTSAVEDGREDLTKKSLSSKRGSELRVSRLNSSKRNEGVWAADKLEGSDVKISLIDKKTNGPFQLYDDQTGNKEIEKPELTILNNPGLGKVPKAAEGEQVAAGWPSWLSSVAGEAIKGWIPRSANTFERLNKIGQGTYSTVYKARDVTHQKIVALKRVRFDNLDPESVKFMAREILLLRRLDHPNIIKLEGLITSQTSRSLYLIFEYMEHDLSGLASRPGIKFSEPQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFNPNHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELFTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKQRLPHAAVFKPPHRYRRSITETFKEYPSASVRLIETLLSIDPAQRGTAESALKSEFFSTEPLACDPSSLPKYPPSKEIDSKLRDEETRRQGAMPKVGSGVRQEKERGVTIPSKHNVDPRISTQQGHHSNSKSRSEVFNKTHREPVSGFLVYPSQKQSHEKEMENNFSGNLNKRPSHSGPLVPGIQWARVGKEVDEGPLGSNRINLSKVSGLVASRTSSSEDQEEKPISLLPRKTIEVKKSVESTNGSDSRRHDRKRQSPRIVDLSQIENARGSTQELTPGGRGYMENKIYLSGPLLASSNMDQMLKDHDRKIQEFSRRSRIDKSRGRKIRAQRK 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0895 694 MobiDBLite consensus disorder prediction 10 37 - -
Prci6g0895 694 FunFam probable serine/threonine-protein kinase At1g54610 216 456 - -
Prci6g0895 694 Gene3D Transferase(Phosphotransferase) domain 1 216 456 - -
Prci6g0895 694 ProSiteProfiles Protein kinase domain profile. 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0895 694 MobiDBLite consensus disorder prediction 670 694 - -
Prci6g0895 694 MobiDBLite consensus disorder prediction 1 41 - -
Prci6g0895 694 SMART serkin_6 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0895 694 MobiDBLite consensus disorder prediction 436 451 - -
Prci6g0895 694 PANTHER CELL DIVISION PROTEIN KINASE 131 423 - -
Prci6g0895 694 SUPERFAMILY Protein kinase-like (PK-like) 126 423 IPR011009 -
Prci6g0895 694 MobiDBLite consensus disorder prediction 424 542 - -
Prci6g0895 694 MobiDBLite consensus disorder prediction 574 622 - -
Prci6g0895 694 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Prci6g0895 694 Gene3D Phosphorylase Kinase; domain 1 120 215 - -
Prci6g0895 694 MobiDBLite consensus disorder prediction 475 491 - -
Prci6g0895 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Prci6g0895 694 MobiDBLite consensus disorder prediction 578 621 - -
Prci6g0895 694 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Prci6g0895 694 CDD STKc_CDK9_like 133 417 - -
Prci6g0895 694 Pfam Protein kinase domain 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0895 Prci-Chr6 6082682 6089657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0895 125 449 Core Cell Cycle Gene Families AT5G10270 49.560 6.89e-114 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci6g0895 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0895 - - gmx:100814156 966.837