Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0854 ATGTTCGGTTTTGTAGATTCCATGGCCCTCAAATCCGCCGTGGAGCTCCGCATTCACATTATACACCGCCACGGCGGACCTATCTCCCTCTCCCAGATCACCGCCTCCCTCTCCGACGCTCCTTCTCCCGACCCTGCCTCCCTCGCCCGCATCATGAGACTTCTCGTCCGCCGCAGCATCTTCACCGCCCACCACCCCTCCGACGGCGGAGATACCCTCTACGGCCTCACCCACTCTTCTCGCTGGCTTCTTGGTGACTCAGACTTGAACCGCCCCGCGCTTCTCATGCAGAACCATCCCACCCTTATGGCTCCCTGGCACTGTCTGAGCCGCTGCGTGCGAGAGGGTGGCACGGCGTTCAAGAAGGCTCATGGCCTAGAGATCTGGGAGTTAGCATCGGAGAGCCCAGAGTTCAACAAGCTATTCAACGACGGGATGGCGTGTACGGCGAGGATGGTGATGAGGGCGCTCACATCGGCGTACGAGGAAGGGTTCCAGAGCATTGGATCGTTGGTGGATGTGGGAGGGAACACCGGAGGGACGGCTTCGGAGATAGTGAAAGTTTATCCCCACATAAAGTGCGTCAACTTTGATCTGCCCCATGTGATCGCCACCGCGCCTGAATACGATGGGATCACCCACGTCGGAGGAGACATGTTCCACTCTATCCCTCCTGCTGATGCTGTTTTCATGAAGTGGATACTGCACGATTGGAGCGACGAAGATTGCATAAAGATACTGAAGAATTGCAGGGAGGCGATAGCAGAAGAGGGAGGGAGGGTGATAATTGCAGAGTTTGTGCTGAAGCCGGACGGGAGCGAAGTGTTCGACGACACAGGGTTGGTCACCGATCTGCTGATGATTGCTCATTCCGCCGGCGGAAGAGAGAGGACTCAGTCGCAGTGGAAGACTCTGTTACACCAAGCTGGCTTCCCTCGTATTCGAATCATCAACACACCCTCTTTCTTATCCATCATTGAGGCTCACCCACTCTGA 996 0.5643 MFGFVDSMALKSAVELRIPXIIHRHGGPISLSQITASLSDAPSPDPASLARIMRLLVRRSIFTAHHPSDGGDTLYGLTHSSRWLLGDSDLNLXPALLMQNHPTLMAPWHCLSRCVREGGTAFKKAHGLEIWELASESPEFNKLFNDGMACTARMVMRALTSAYEEGFQSIGSLVDVGGNTGGTASEIVKVYPHIKCVNFDLPHVIATAPEYDGITHVGGDMFHSIPPADAVFMKWILHDWSDEDCIKILKNCREAIAEEGGRVIIAEFVLKPDGSEVFDDTGLVTDLLMIAHSAGGRERTQSQWKTLLHQAGFPRIRIINTPSFLSIIEAHPL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0854 333 SUPERFAMILY "Winged helix" DNA-binding domain 1 88 IPR036390 -
Prci6g0854 333 Pfam Dimerisation domain 8 57 IPR012967 GO:0046983
Prci6g0854 333 PIRSF O-mtase 1 332 IPR016461 GO:0008168
Prci6g0854 333 PANTHER O-METHYLTRANSFERASE 7 313 IPR016461 GO:0008168
Prci6g0854 333 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 330 IPR029063 -
Prci6g0854 333 Gene3D Vaccinia Virus protein VP39 87 333 IPR029063 -
Prci6g0854 333 Gene3D - 1 84 IPR036388 -
Prci6g0854 333 Pfam O-methyltransferase domain 108 313 IPR001077 GO:0008171
Prci6g0854 333 FunFam O-methyltransferase family protein 86 331 - -
Prci6g0854 333 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 332 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0854 Prci-Chr6 5882090 5884527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0854 8 329 Monolignol Biosynthesis Gene Families AT5G54160 41.159 1.39e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0854 K22588 - tcc:18608674 477.633