Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0853 ATGGGAGAGAATTCAATGGAAGGGGAGGAGGCTTTGATATTACAAGGTCAAGCTGATATATGGAAGCACATGTTCAGCTTCGTAGATTCCATGGCCCTGAAATCCGCCGTGGAGCTCCGCATTCCTGACATAATACACCGCCACGGCGGACCGATCACCCTGTTTCAGATCATCGCCTCTCTGTCCGACGCTCCATCTCCAGACACCGCCTACCTCGCCCGCATCATGAGGCTCCTCGTCCGCCGCAACATCTTCTCCGCCCATCGCCCATCCCACGGGGGAGACACCCTCTACGGCCTCACTCACTCTTCCCGGTGGCTCCTGCGTGACTCCGCCGTGAACCTAGCACCCATGATTGTCATGGAGAACCACCCAACCCTTGTGGCTCCGTGGCACTATCTCAGCCAGTGCGTGAGAGAAGGAGGCGTGGCGTTCAAAAAGGCTCACGGCCGTGAGATATGGGAGCTGGCGGCGGAGAGTGCAGAATTCAACGAGCTGTTCAATGAAGGGATGAAGTGTACGGGTAAGATGGCGATGATGGCGATCGTATCGGCGTACAAGGAAGGGTTCGAGAGCATCGGGTCGCTGGTGGATGTGGGAGGCGGCACCGGAGGAACGGTGTCGGAGATAGTGAAAGCATATCCCCACATAAAAGGCATCAACTTTGATCTGCCTCATGTGGTGGCCACCGCACCTGAATACAACGGAGTCACCCACGTCGGAGGAGACATGTTCCACTCCATCCCTCCTGCCGATGCTGTTTTCATGAAGTGGCTACTGCATGATTGGAGCGACGAAGATTGCATAAAGATACTGAAGAACTGCAAGAAATCAATAGCAGAAGAAAAAGGGAAGGTGATAATAGCAGAGTTTGTGGTGAAGGCAGAGGGTGAAGGCTTGTTCGATGACATAGGGTTACTCTTCGACTTGTTGATGATAGCACATTCCTCAGGCGGCAAAGAGAGGACTGAATCTGAGTGGAAGAATCTGCTTCACCAAGCTGGCTTCCCTCGCTGTCACATCATCAACACACCCTCTCTTTTATCCATCATCCAAGCTTACCCTATTTGA 1071 0.5331 MGENSMEGEEALILQGQADIWKHMFSFVDSMALKSAVELRIPDIIHRHGGPITLFQIIASLSDAPSPDTAYLARIMRLLVRRNIFSAHRPSHGGDTLYGLTHSSRWLLRDSAVNLAPMIVMENHPTLVAPWHYLSQCVREGGVAFKKAHGREIWELAAESAEFNELFNEGMKCTGKMAMMAIVSAYKEGFESIGSLVDVGGGTGGTVSEIVKAYPHIKGINFDLPHVVATAPEYNGVTHVGGDMFHSIPPADAVFMKWLLHDWSDEDCIKILKNCKKSIAEEKGKVIIAEFVVKAEGEGLFDDIGLLFDLLMIAHSSGGKERTESEWKNLLHQAGFPRCHIINTPSLLSIIQAYPI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0853 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Prci6g0853 356 Gene3D - 3 107 IPR036388 -
Prci6g0853 356 Gene3D Vaccinia Virus protein VP39 110 356 IPR029063 -
Prci6g0853 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 355 IPR016461 GO:0008168
Prci6g0853 356 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Prci6g0853 356 FunFam O-methyltransferase family protein 109 354 - -
Prci6g0853 356 Pfam Dimerisation domain 31 80 IPR012967 GO:0046983
Prci6g0853 356 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
Prci6g0853 356 SUPERFAMILY "Winged helix" DNA-binding domain 11 111 IPR036390 -
Prci6g0853 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 352 IPR029063 -
Prci6g0853 356 PANTHER O-METHYLTRANSFERASE 15 336 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0853 Prci-Chr6 5872238 5873688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0853 31 342 Monolignol Biosynthesis Gene Families AT5G54160 40.379 6.88e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0853 K22588 - qsa:O6P43_028783 497.278