Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0818 ATGCGTTGGTCTTCTTTCTACCAGACAGCCTCAAGGGCCTTTCATCAGTCTCCTTCCTGGTCCAAGGTTCTTGTCGTCTGCACTGTCAGCGGTGGAGGTTTAGTGGCATATGCTGATGCGAGTGGCGGAGACAAATGCCCGAAGAAGAAGGTGGTGGTGGTGGGAACTGGATGGGCTGGGACCAGTTTTGTGAAGAATCTGAAAAACCCTTTGTTTGATGTGGAAGTGGTTTCGCCTCGTAACTATTTTGCATTTACGCCTTTGCTTCCAAGCGTTACTATAGGCACAGTGGAATCAAGAAGCATTGTTGAACCAATTCGCAAAATAATCCGGAAGAAGAACGTAAACATGCAATTCACACAAGCTGAATGCTTTAAGATCGATGCCAAGAATAAGAAAGTATACTGTCGTTCTACTCAAGACAGCAAAAATGGCAAACAAGAATATTCCGTTGATTATGACTACCTCGTTCTAGCAATGGGAGCCCGTTCTAACACATTTAACACCCCAGGTGTTGAAGAGTATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGAGAATCCGTCGAAAAGTGATTGAACTATTCGAAAAGGCAAGCCTGCCATGCGTACCAGAAGAGGAGAAGAAGAAACTCCTGCATTTTGTGGTGGTTGGTGGTGGTCCGACTGGTGTAGAGTTTGCTGCAGAGCTTCATGATCATGTTCATCAGGATTTATACAAACTATATCCTTCTGCCAAAGACTACGTAAAGATTACGCTTTTGGAAGCAGGCGATCATATTCTAAACATGTTTGACAAGAGGATTACTGAGTTTGCAGAAGCAAAGTTCCAAAGAGATGGGATTGATGTGAAACTAGGTTCAATGGTTGTGAAAGTGGCTGAGAATGAAATTTGTACAAAAGAAAGAGGAACTGGTAAGGTTGTATCTCTACCTTATGGAATGGTGGTTTGGTCGACTGGTATTGGTCCTCGTCCTGAAGTTGTTCAATTTATGAAAGATATTGGTCAGGGTAGTAGGCGCGCAATTAGCACTGATGAATGGTTGAGAGTGGAAGGATTTGGCGACATCTATGCCCTGGGAGATTGTGCCACTGTAAATCAACGGAGAGTTATGGAAGATATAGCAGTTATATTTAGCAAGGCAGACAAGAACAACATCGGAAAATTAGATCTGGATCATTTTCAAGAGGTTGTTGGAGACATCATTGAGAGGTACCCACAAGTGGATATTTATTTAAAGAAGAAGCAAATGAGTAACATATTGGCACTAATGAAGAACTCTCAAGACAACGCTGCTCTGGTGGACATTGAAACATTCAAATCTTGTCTTTCCGAAGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCCGCTCAACAAGGTGAGTATCTTGCAGATTGTTTCAACCGAATGGAGAAGTGTGAGAAATATCCTGAAGGGCCACTTAGGTTTAGAGGAACAGGACGTCATCGTTTTCGTCCCTTCAGGTACAAGCATTTCGGGCAATTTGCTCCGTTAGGAGGAGAACAAGCAGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATCGGACACAGCACCCAGTGGCTCTGGTATTCTGTATATGCAAGCAAACAAGTGAGCTGGCGTACCAGGTATTTGGTGGTGGCTGATTGGGGAAGACGCGTCATATTCGGCAGGGACTCAAGTGGAATATGA 1707 0.44 MRWSSFYQTASRAFHQSPSWSKVLVVCTVSGGGLVAYADASGGDKCPKKKVVVVGTGWAGTSFVKNLKNPLFDVEVVSPRNYFAFTPLLPSVTIGTVESRSIVEPIRKIIRKKNVNMQFTQAECFKIDAKNKKVYCRSTQDSKNGKQEYSVDYDYLVLAMGARSNTFNTPGVEEYTHFLKEVEDAQRIRRKVIELFEKASLPCVPEEEKKKLLHFVVVGGGPTGVEFAAELHDHVHQDLYKLYPSAKDYVKITLLEAGDHILNMFDKRITEFAEAKFQRDGIDVKLGSMVVKVAENEICTKERGTGKVVSLPYGMVVWSTGIGPRPEVVQFMKDIGQGSRRAISTDEWLRVEGFGDIYALGDCATVNQRRVMEDIAVIFSKADKNNIGKLDLDHFQEVVGDIIERYPQVDIYLKKKQMSNILALMKNSQDNAALVDIETFKSCLSEVDSQMKNLPATAQVAAQQGEYLADCFNRMEKCEKYPEGPLRFRGTGRHRFRPFRYKHFGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVVADWGRRVIFGRDSSGI 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0818 568 PANTHER NADH DEHYDROGENASE 44 567 IPR045024 GO:0003954|GO:0006116
Prci6g0818 568 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 416 567 - -
Prci6g0818 568 Gene3D - 42 390 - -
Prci6g0818 568 Gene3D - 408 567 - -
Prci6g0818 568 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Prci6g0818 568 Pfam Pyridine nucleotide-disulphide oxidoreductase 49 373 IPR023753 GO:0016491
Prci6g0818 568 SUPERFAMILY FAD/NAD(P)-binding domain 214 368 IPR036188 -
Prci6g0818 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 153 171 - -
Prci6g0818 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 51 70 - -
Prci6g0818 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 232 - -
Prci6g0818 568 SUPERFAMILY EF-hand 325 454 IPR011992 -
Prci6g0818 568 SUPERFAMILY FAD/NAD(P)-binding domain 48 266 IPR036188 -
Prci6g0818 568 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 40 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0818 Prci-Chr6 5634504 5637732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0818 1 568 Chloroplast and Mitochondria Gene Families AT4G21490 67.986 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0818 K03885 - qsa:O6P43_028759 903.279