Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0817 ATGCGTTGGTCTTCTTTCTACCAGACAGCCTCAAGGGCCTTTCATCAGTCTCCTTCCTGGTCCAAGGTTCTTGTCGTCTGCACTGTCAGCGGTGGAGGTTTAGTGGCATATGCTGATGCGAGTGGCGGAGACAAATGCCCGAAGAAGAAGGTGGTGGTGGTGGGAACTGGATGGGCTGGGACCAGTTTTGTGAAGAATCTGAAAAACCCTTTGTTTGATGTGGAAGTGGTTTCGCCTCGTAACTATTTTGCATTTACGCCTTTGCTTCCAAGCGTTACTATAGGCACAGTGGAATCAAGAAGCATTGTTGAACCAATTCGCAAAATAATCCGGAAGAACGTAAACATGCAATTCACACAAGCTGAATGCTTTAAGATCGATGCCAAGAATAAGAAAGTATACTGTCGTTCTACTCAAGACAGCAAAAATGGCAAACAAGAATATTCCGTTGATTATGACTACCTCGTTCTAGCAATGGGAGCCCGTTCTAACACATTTAACACCCCAGGTGTTGAAGAGTATACTCACTTCTTGAAGGAAGTGGAAGATGCTCAGAGAATCCGTCGAAAAGTGATTGAACTATTCGAAAAGGCAAGCCTGCCATGCGTACCAGAAGAGGAGAAGAAGAAACTCCTGCATTTTGTGGTGGTTGGTGGTGGTCCGACTGGTGTAGAGTTTGCTGCAGAGCTTCATGATCATGTTCATCAGGATTTATACAAACTATATCCTTCTGCCAAAGACTACGTAAAGATTACGCTTTTGGAAGCAGGCGATCATATTCTAAACATGTTTGACAAGAGGATTACTGAGTTTGCAGAAGCAAAGTTCCAAAGAGATGGGATTGATGTGAAACTAGGTTCAATGGTTGTGAAAGTGGCTGAGAATGAAATTTGTACAAAAGAAAGAGGAACTGGTAAGGTTGTATCTCTACCTTATGGAATGGTGGTTTGGTCGACTGGTATTGGTCCTCGTCCTGAAGTTGTTCAATTTATGAAAGATATTGGTCAGGGTAGTAGGCGCGCAATTAGCACTGATGAATGGTTGAGAGTGGAAGGATTTGGCGACATCTATGCCCTGGGAGATTGTGCCACTGTAAATCAACGGAGAGTTATGGAAGATATAGCAGTTATATTTAGCAAGGCAGACAAGAACAACATCGGAAAATTAGATCTGGATCATTTTCAAGAGGTTGTTGGAGACATCATTGAGAGGTACCCACAAGTGGATATTTATTTAAAGAAGAAGCAAATGAGTAACATATTGGCACTAATGAAGAACTCTCAAGACAACGCTGCTCTGGTGGACATTGAAACATTCAAATCTTGTCTTTCCGAAGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCCGCTCAACAAGGTGAGTATCTTGCAGATTGTTTCAACCGAATGGAGAAGTGTGAGAAATATCCTGAAGGGCCACTTAGGTTTAGAGGAACAGGACGTCATCGTTTTCGTCCCTTCAGGTACAAGCATTTCGGGCAATTTGCTCCGTTAGGAGGAGAACAAGCAGCAGCTCAGCTTCCGGGAGATTGGGTTTCAATCGGACACAGCACCCAGTGGCTCTGGTATTCTGTATATGCAAGCAAACAAGTGAGCTGGCGTACCAGGTATTTGGTGGTGGCTGATTGGGGAAGACGCGTCATATTCGGCAGGGACTCAAGTGGAATATGA 1704 0.4401 MRWSSFYQTASRAFHQSPSWSKVLVVCTVSGGGLVAYADASGGDKCPKKKVVVVGTGWAGTSFVKNLKNPLFDVEVVSPRNYFAFTPLLPSVTIGTVESRSIVEPIRKIIRKNVNMQFTQAECFKIDAKNKKVYCRSTQDSKNGKQEYSVDYDYLVLAMGARSNTFNTPGVEEYTHFLKEVEDAQRIRRKVIELFEKASLPCVPEEEKKKLLHFVVVGGGPTGVEFAAELHDHVHQDLYKLYPSAKDYVKITLLEAGDHILNMFDKRITEFAEAKFQRDGIDVKLGSMVVKVAENEICTKERGTGKVVSLPYGMVVWSTGIGPRPEVVQFMKDIGQGSRRAISTDEWLRVEGFGDIYALGDCATVNQRRVMEDIAVIFSKADKNNIGKLDLDHFQEVVGDIIERYPQVDIYLKKKQMSNILALMKNSQDNAALVDIETFKSCLSEVDSQMKNLPATAQVAAQQGEYLADCFNRMEKCEKYPEGPLRFRGTGRHRFRPFRYKHFGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVVADWGRRVIFGRDSSGI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0817 567 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 415 566 - -
Prci6g0817 567 SUPERFAMILY FAD/NAD(P)-binding domain 48 265 IPR036188 -
Prci6g0817 567 SUPERFAMILY EF-hand 324 453 IPR011992 -
Prci6g0817 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 213 231 - -
Prci6g0817 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 51 70 - -
Prci6g0817 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 152 170 - -
Prci6g0817 567 Pfam Pyridine nucleotide-disulphide oxidoreductase 49 372 IPR023753 GO:0016491
Prci6g0817 567 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Prci6g0817 567 Gene3D - 407 566 - -
Prci6g0817 567 Gene3D - 42 396 - -
Prci6g0817 567 SUPERFAMILY FAD/NAD(P)-binding domain 213 367 IPR036188 -
Prci6g0817 567 PANTHER NADH DEHYDROGENASE 44 566 IPR045024 GO:0003954|GO:0006116
Prci6g0817 567 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 40 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0817 Prci-Chr6 5634504 5637732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0817 1 567 Chloroplast and Mitochondria Gene Families AT4G21490 68.103 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0817 K03885 - qsa:O6P43_028759 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0817 6 5634504 5637732 Prci6g0817 6 5634504 5637732 ECH