Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0804 ATGGCGTTTGACCTTGAAAACCCTTTTTCAAGCTTTTACGACCTTCACTCTGACCCTCCCACCTCTACTCTCTTCCTCGTCGAATCTGATCACGTCCCGCCCCAAACCTACTTCCACACTCTCAAGTCCCGGGATTTCGACATCACTGTTAGAAGAGAGGTCATTTCTTCAATCTCCCAGTTGTCCTGCACATGTGATCCGCTCTTGTCGTACCTAGCCGTTAACTATGTGGATCGCTTTCTTGCCAACCGAGGGATTTCGCAACCAAAGTCATGGATCCACAGGCTCCTAGCAGTCTCTTGCCTCTCTCTAGCCGCCAAGATGATGAAAACAGAGTTTTCTGTATCTGATATACAGGGCGAGGGAGGTATAATTTTCGAACGGCGAACAGTACGAAGAATGGAGTCACTTATCTTAGGAGCCCTACAATGGCGAATGCGTTCAATCACTCCCTTCTCTTTCATTCCCTTCTTCATTGCTTTGTTCAGACTCAAGGACCTGCAACTGGGACAGGTTCTGAAAGATCGAGCCACTGAAATTATAATCAGATCACAAAGAGAGATAAGGCTCTTGGAATTTAAGCCTTCAATAGTTGCTGCATCAGCCCTCCTCTCTGCGTCTCAAGTATTGCTACCTTTGCAGTATCCGTGCTTCCTAAGAGCAATATCCCACTGTGCATACGTAAATAAAGAAAGTATATTGAAGTGCAATAATGTGATACAAGACATAACAATGGAGGGGTGCGAGTCTGCGTTCGATTTGGTTTCAAGTTCGGAGACACCTATTAATGTGTTAGACCATCATTTTCTGAGCTCAGAAAGCGAAAAAACCAACGGAACCACTATTGCTGCCTCTACTCTGAGACAAGAGAAGGACATTAAGAGAAGGAAAACAGCTGGTTACGGCAATAATCACGGGCTCCGGATTTCTCAGATCGAACAATGCTGA 948 0.4546 MAFDLENPFSSFYDLHSDPPTSTLFLVESDHVPPQTYFHTLKSRDFDITVRREVISSISQLSCTCDPLLSYLAVNYVDRFLANRGISQPKSWIHRLLAVSCLSLAAKMMKTEFSVSDIQGEGGIIFERRTVRRMESLILGALQWRMRSITPFSFIPFFIALFRLKDLQLGQVLKDRATEIIIRSQREIRLLEFKPSIVAASALLSASQVLLPLQYPCFLRAISHCAYVNKESILKCNNVIQDITMEGCESAFDLVSSSETPINVLDHHFLSSESEKTNGTTIAASTLRQEKDIKRRKTAGYGNNHGLRISQIEQC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0804 315 SMART cyclin_7 53 140 IPR013763 -
Prci6g0804 315 FunFam D6-type cyclin 144 238 - -
Prci6g0804 315 FunFam D6-type cyclin 34 143 - -
Prci6g0804 315 SUPERFAMILY Cyclin-like 130 245 IPR036915 -
Prci6g0804 315 Gene3D - 25 237 - -
Prci6g0804 315 Pfam Cyclin, N-terminal domain 27 146 IPR006671 -
Prci6g0804 315 Pfam Cyclin, C-terminal domain 149 244 IPR004367 -
Prci6g0804 315 PANTHER CYCLINS 49 240 IPR039361 -
Prci6g0804 315 SMART Cyclin_C_2 149 274 IPR004367 -
Prci6g0804 315 Gene3D - 34 147 - -
Prci6g0804 315 SUPERFAMILY Cyclin-like 21 146 IPR036915 -
Prci6g0804 315 CDD CYCLIN_AtCycD-like_rpt2 149 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0804 Prci-Chr6 5521508 5523687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0804 1 295 Core Cell Cycle Gene Families AT4G03270 45.307 4.47e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0804 K18812 - gmx:100799951 402.519