Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0802 ATGAGAAGCCCTTACTATGACAAAAATGGAGTGAAGAGAGGTGCGTGGAGTAAGGAGGAGGATGAAAAGTTAAGGGCATTTATTGAGAGATACGGCCACAGCAATTGGCGTCAACTTCCCAAACACGCAGGTTTATCAAGGTGTGGAAAGAGTTGCCGACTTCGCTGGCTAAATTACTTGCGCCCGGAGGTAAAGCGTGGAAATTACACCCCAGAAGAGGACGAACTCATCATCAAATTACATGAACAACATGGAAATAAATGGTCTTTGATTGCCAAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCACCTAAAGAAGCACGTGGAGTGCAGTCATGGGGGGATATCTGAGATCAAAACGAAGCCAAGTGGTACTTGTAGGGGAGAAACAGCAAAGTATTTCGAACCTGAAAACCCTTTGCTTGGTTTTGCTGCTGCTTCCTCCTCAAGCAATATTTCAGAAAGCTCACCACCCATCTGCAATTCATCTTCAGCCTTCACCTTCGGAGAAGAAAGCGTTGCTAATGGTGCATGGGAAATATTTGAACAGTTCGACGATTTTTGGACCCAACCATTTATGCCGGAAAATACATCTGACCAGGATCATTATCCAAGTCTAAACTATGCAGCAAATGCAGCAGACTTGGACGAATATTCCTCATACCTCTTTGATAATGCCGAGTTTTTGTGCCAAGGGTTGCAAGAATTTCCAGAAGATCCTAAAAACGTATAA 753 0.4369 MRSPYYDKNGVKRGAWSKEEDEKLRAFIERYGHSNWRQLPKHAGLSRCGKSCRLRWLNYLRPEVKRGNYTPEEDELIIKLHEQHGNKWSLIAKRLPGRSDNEIKNHWHSHLKKHVECSHGGISEIKTKPSGTCRGETAKYFEPENPLLGFAAASSSSNISESSPPICNSSSAFTFGEESVANGAWEIFEQFDDFWTQPFMPENTSDQDHYPSLNYAANAADLDEYSSYLFDNAEFLCQGLQEFPEDPKNV 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0802 250 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Prci6g0802 250 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Prci6g0802 250 FunFam Transcription factor RAX3 6 66 - -
Prci6g0802 250 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 169 - -
Prci6g0802 250 Gene3D - 68 132 - -
Prci6g0802 250 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Prci6g0802 250 CDD SANT 68 111 IPR001005 -
Prci6g0802 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci6g0802 250 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Prci6g0802 250 CDD SANT 15 60 IPR001005 -
Prci6g0802 250 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Prci6g0802 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Prci6g0802 250 SMART sant 65 113 IPR001005 -
Prci6g0802 250 SMART sant 12 62 IPR001005 -
Prci6g0802 250 Gene3D - 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0802 Prci-Chr6 5504701 5506063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0802 2 158 MYB Transcription Factor Family AT2G31180 51.807 1.74e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci6g0802 Myb_DNA-binding 5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0802 K09422 - qsu:111986407 231.876