Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0799 ATGGAGTTAAAAAAGGTGCATGGAGCGAAGAAGAAGACCAGAAGCTTATTTCTTATATTCAGACCCACGGCCATCCTAATTGGCGCCAACTCCCCAAGCTTGGCGAGGTGTGGAAAGAGTTGCAGGCTTCGATGGATGAACTACCTGCGACCAAATCTCAAACGTGGGAACTACACTCCACAAGAGGAGGAACTCATCCTCAAACTTCACGAACAGCATGGAAATAAGTGGTCGCTGATTGCTGAGAAGCTGCCTGGAAGAACCGACAACCACATAAAGAATCACTGGCACAGCCAACTCAAGAGGCGATCGAGGGACAGAGGAAGGAATGATTCTGAGGTGAAAGGCAAGAAAACAGGTCGTAACAATGCGACCAAGCATCCAGAATCTGATATTGTGAAAGTCGTGAATGAGTTGAATAATATATTAGAGAGCTCATCCTTGAACTGGACGGAAACGACGTCGTCGTGGACCACGGCAGATCAAGACAACTCTGTTTCTCTGCCTTCTAATGATATAGGATCGACCGCCAAAAATTCCCCGGAAGAGTATAACAGCGTGGCTTCACGGGAAGCCAGCAGATTTCAAGAATTCAGCGGCGATTTTTGGACCGAGCCGTTTATATCAGAAGATATGTACAGTGAATATTGCTATCCACATATTGGGGGCGACGGTGGCAGCGCCGGCGGAGACATTTTTTCATATGATGGGGCACTCTTGTTTTTCTAA 729 0.4705 MELKKVHGAKKKTRSLFLIFRPTAILIGANSPSLARCGKSCRLRWMNYLRPNLKRGNYTPQEEELILKLHEQHGNKWSLIAEKLPGRTDNHIKNHWHSQLKRRSRDRGRNDSEVKGKKTGRNNATKHPESDIVKVVNELNNILESSSLNWTETTSSWTTADQDNSVSLPSNDIGSTAKNSPEEYNSVASREASRFQEFSGDFWTEPFISEDMYSEYCYPHIGGDGGSAGGDIFSYDGALLFF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0799 242 MobiDBLite consensus disorder prediction 154 184 - -
Prci6g0799 242 MobiDBLite consensus disorder prediction 104 132 - -
Prci6g0799 242 MobiDBLite consensus disorder prediction 88 132 - -
Prci6g0799 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Prci6g0799 242 SUPERFAMILY Homeodomain-like 36 107 IPR009057 -
Prci6g0799 242 CDD SANT 57 97 IPR001005 -
Prci6g0799 242 Gene3D - 11 54 - -
Prci6g0799 242 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Prci6g0799 242 SMART sant 54 102 IPR001005 -
Prci6g0799 242 PANTHER MYB DOMAIN PROTEIN 55 34 187 - -
Prci6g0799 242 Pfam Myb-like DNA-binding domain 55 99 IPR001005 -
Prci6g0799 242 Gene3D - 57 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0799 Prci-Chr6 5486806 5488327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0799 31 168 MYB Transcription Factor Family AT1G35515 48.571 4.52e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci6g0799 Myb_DNA-binding 5.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0799 K09422 - gmx:100781032 165.236