Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0796 ATGAGGAACCCACGCAGTGACTCTAATGGATTAAAGAAAGGTACTTGGACGCCAGAAGAAGACCGCAAGCTCATTGCTTATGTTACTAGGTATGGCTGTTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGTCTAGCAAGGTGTGGGAAGAGTTGCAGACTGAGGTGGCTCAATTATCTGAGACCCGACGTCAAAAGAGGCAACTACACTAAGGAAGAAGATGAACTTATCATTAAACTCCACCAACAGCTTGGCAACAGATGGTCTGCTATAGCAGCTAAGCTGCCAGGAAGAACAGACAATGAAATAAAGAACCACTGGCACACCAACCTCAAGAACAAAAGCCAAACTCATCCTCAGAACAACTCAGTCGCTGCTGACAAGGATGAGATTATCCTCAAACCAAGCGACCCATATCATTCTCAAGGCATCATTGATTCAGCAACTTCCACGGTCGGCCACGACAACGGGAAATCGGGGTCTGAATCAACCTTGTGCGAATCCTCCGACATAACGACGTCGGAAAGCAACCAGGATTTGGTCGGACATCATGAGTTCTCTTTTCTGGATGCGTATACTGAGCCGATGAGCGGAAATTTCTGGACGGATCCATGCGTGGTTGATTCTGACGTTCTCTATTACCCCCATACTGAAATACCGCCACTCGAGACTGGACCTCAATTCCTTACTCCAATGTCCAATGTCGCACAGCTTTGGACTCACAATAATTTCTACGACCAATGTTTTGGTCTCTTTTGCAATTATAATCAATAG 774 0.4651 MRNPRSDSNGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPDVKRGNYTKEEDELIIKLHQQLGNRWSAIAAKLPGRTDNEIKNHWHTNLKNKSQTHPQNNSVAADKDEIILKPSDPYHSQGIIDSATSTVGHDNGKSGSESTLCESSDITTSESNQDLVGHHEFSFLDAYTEPMSGNFWTDPCVVDSDVLYYPHTEIPPLETGPQFLTPMSNVAQLWTHNNFYDQCFGLFCNYNQ 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0796 257 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Prci6g0796 257 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Prci6g0796 257 MobiDBLite consensus disorder prediction 143 177 - -
Prci6g0796 257 FunFam MYB-related transcription factor 12 65 - -
Prci6g0796 257 CDD SANT 68 111 IPR001005 -
Prci6g0796 257 CDD SANT 15 60 IPR001005 -
Prci6g0796 257 Gene3D - 67 132 - -
Prci6g0796 257 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Prci6g0796 257 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 172 - -
Prci6g0796 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci6g0796 257 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Prci6g0796 257 SMART sant 65 113 IPR001005 -
Prci6g0796 257 SMART sant 12 62 IPR001005 -
Prci6g0796 257 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Prci6g0796 257 Gene3D - 5 65 - -
Prci6g0796 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0796 Prci-Chr6 5442078 5443109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0796 2 211 MYB Transcription Factor Family AT1G06180 46.262 1.07e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci6g0796 Myb_DNA-binding 8.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0796 K09422 - gmx:100778518 248.44