Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0792 ATGAGAGCTGTCATTGTCGTTCTGTTCTCTTTCACTGGCTGGTTGCTGTGTTTTTCTCAGCTACATCTGGCTCAAGATACTTTAGAGCCTGGCGAAGAGATTACTGGTGATGCCACCCTTGTTTCAAAGGAAGGCAAATTTATACTGGGTTTCTTCTCCCCACGACAAGATTCAACAAAGTACTTAGGAATATGGTACAACGAGTCACAAGTACAGCCACGAACGGTGGTATGGGTTGCGAACAGGGCCCCTGTTCCAGACTCCATGGCATCTTTTCAAATCGCAGACGATGGAAACCTCCGAGTATCAGACTCCAATGGAAAAGGCTACTGGTCTTCCGGGCTCGAGGGATCTTCATCCTTAAACCGTACAGTGAAGCTTATGGACTCAGGAAACCTGGTACTCATAGATGACGAGGTCAGAACAAATAATCGCTGGCAGAGCTTTGAACATCCAACGGACACATTTCTGCCTTCCATGAAAATGGATAAAAACATGAACTTGACATCTTGGAGAAGCTCTGATGACCCATCCCCGGGGAACTACACCTTTCAGCTTGCTCAAACAGGGAGCAACAGCTTTACAATTTGGAAAAATCAGCGCCAACTTTTCTGGAAACCTTCAGAGCCAATCCCCCTGTCATTATTGAGATTGTTGACAAACTCCTCTCAGCAACAGCCGTTGACTGATCATCCAAGGCTAGTCATGAACTATACAGGGAAGATCGAATTGCAGAGGTACAACGATGATAATCTCGAAAGTGGATGGTCAGCGGCGTTTAGCGAACCTACAGAGTGCAAAATATACAATGCGTGTGGGAGTTTTAGCATCTGCAATGATCAGAATCGCCCTGTCTGTAAGTGTTTGCCCGGATTCGATCCTTTGCCAACTAAAAATTCCTCCGGAGAACAGGATAATGGGTGTGTCAGAAAATCTACATCGTGTGGAGGAAAAGACATTACATTTTTAAACTTGACGATGGTTGAAGTGGGAAGCTCGGGTAAACCAGTTGCAGCAGGAAATGAAGCAGAGTGCCAATCTGTGTGTCTCAACGACTGCTCTCGATGCCAGGCTTATTCGTATAATACTAGATTATCGGTTCGGAATCCTGTTTGCTTGATCTGGACTCAGGATTTACCTACTCTTACAGAAGATTCCCCTAAATATGGCATTTCTCTTTCCGTCCGCCTACAGGTTTCAGACATGGCATCAATTGCCAAAACCTGTGAACCTTGCGGCACAACAATAATTCCATATCCACTAAGCACTGGGCAAGATTGTGGGGATCCCTTGTACTTCAAGCTCAAATGCGACAACACAACAAAAACAGGCGAGGTTAGCTTCAATATGTCTGAACTTGGGCTTCTTCGGGTGTCTAAAATAGACTCAGATAATCGGAAGTTGCGAATCCAAACTAATGAGTTCAACTTCTGTGATGGCAAAGATCAAAGACAAAAGGTTAAGGTTGACTTACCCTTTAACGTAACCGACTGGTGCTTTGGTATAAAGGAAATAGAGGTTAGTTGGTTACCACCATCAGAACCTCTCTGCCATAGCATGACAGACTGCAACGACTGGCCGCATTCGACCTGCAACAATGATTCGAAAGATGGAAAACCAAGGTGCCTTTGTAATACGAACTATTACTGGAACAATTCAACTTTAAATTGCACCCCAGGTGTCCTTTCCACCTTACACGAGCCATCTGGAAGAAGAAAATCACTCACAGTAATTATTGTGGCAACTCTCTTAAGCGTGGCTTTCATAACTTGCATGGTTGTTTTTGCTTATCTATGGAAAAAGAGAATAGCACGAAAGAAAGAAAGGGGAAGAGTTCAGAGAAATCGAGGGCGGATGTATGACAGTGGGAGACAAGTGAAAGATTTGATATACTTGGAAGAGCTAGAAGAAAAAGACAACGAAGGCATAGAGGTACCGCAGTATGATTTTGAAACCATACTGGCTGCTACAGATAACTTTTCAGATGCCAACAAGCTAGGACGAGGAGGTTACGGACCTGTTTACAAGGGTATATTATCCGGCGAACAGCATATAGCAGTAAAGAGGCTTTCAAATGTTTCATCGCAAGGTTTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCGAAGCTACAGCATCGAAACCTTGTCAGACTTCGGGGCTACTGCATGACGGGAGAGGAAAAAATCTTACTTTACGAATACATGCCAAATAAGAGTTTAGACGCATTCTTGTTCGATCGTACGCGAAATCTGATATTAGATTGGCAGTTGCGGTTTAACATAATTCTAGGAGTTGCTCGAGGAATGTTATATCTTCATCAAGATTCTAGATTGAGAGTTATTCATAGAGATTTAAAAACCAGCAACATTCTTCTAGACGAGGAGATGCAACCAAAAATTTCAGACTTTGGTTTGGCTAGAATATTTGGAAACAAAGAAATTGAGGCTAACACTGAGAGAATAGTTGGAACTTATGGATATATGGCTCCAGAATATGCATTGGATGGATTATTCTCAATCAAATCAGATGTTTTTAGTTTTGGTGTAGTAATTCTTGAAATAATCAGTGGAAAGAAAAATACAGGATTCTTTCAATCCAAACAAGCTTCCAGCCTTTTAGGTTATGCGTGGAGACTATGGACAGAGAACAAGTTGATGGATTTAATGGACCGGTCTTTGAATGAAAGTTGCAATGCACACCAATTCGTAAAGTGTGCACAAATGAGCCTATTGTGCGTGCAAGATGAACCAAGAGACAGGCCCACCATGTCACAGGCAGTGATAATGCTTGAAAGCGAGATTACAAGCCTGCCAACTCCAAAGCAACCATCTTTCTTTATCACAAGAGGCTTTTCTGGCTCAGCTTCTTCTTCCAGCAAACCTGAAGGAATTCTTTCAACCGAGAGCACCTACCAAGAAGGTCGTTAG 2931 0.4275 MRAVIVVLFSFTGWLLCFSQLHLAQDTLEPGEEITGDATLVSKEGKFILGFFSPRQDSTKYLGIWYNESQVQPRTVVWVANRDXPVPDSMASFQIADDGNLRVSDSNGKGYWSSGLEGSSSLNRTVKLMDSGNLVLIDDEVRTNNRWQSFEHPTDTFLPSMKMDKNMNLTSWRSSDDPSPGNYTFQLAQTGSNSFTIWKNQRQLFWKPSEPIPLSLLRLLTNSSQQQPLTDHPRLVMNYTGKIELQRYNDDNLESGWSAAFSEPTECKIYNACGSFSICNDQNRPVCKCLPGFDPLPTKNSSGEQDNGCVRKSTSCGGKDITFLNLTMVEVGSSGKPVAAGNEAECQSVCLNDCSRCQAYSYNTRLSVRNPVCLIWTQDLPTLTEDSPKYGISLSVRLQVSDMASIAKTCEPCGTTIIPYPLSTGQDCGDPLYFKLKCDNTTKTGEVSFNMSELGLLRVSKIDSDNRKLRIQTNEFNFCDGKDQRQKVKVDLPFNVTDWCFGIKEIEVSWLPPSEPLCHSMTDCNDWPHSTCNNDSKDGKPRCLCNTNYYWNNSTLNCTPGVLSTLHEPSGRRKSLTVIIVATLLSVAFITCMVVFAYLWKKRIARKKERGRVQRNRGRMYDSGRQVKDLIYLEELEEKDNEGIEVPQYDFETILAATDNFSDANKLGRGGYGPVYKGILSGEQHIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCMTGEEKILLYEYMPNKSLDAFLFDRTRNLILDWQLRFNIILGVARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLARIFGNKEIEANTERIVGTYGYMAPEYALDGLFSIKSDVFSFGVVILEIISGKKNTGFFQSKQASSLLGYAWRLWTENKLMDLMDRSLNESCNAHQFVKCAQMSLLCVQDEPRDRPTMSQAVIMLESEITSLPTPKQPSFFITRGFSGSASSSSKPEGILSTESTYQEGR 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0792 977 Gene3D - 19 151 IPR036426 -
Prci6g0792 977 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 178 IPR036426 -
Prci6g0792 977 Gene3D Phosphorylase Kinase; domain 1 626 736 - -
Prci6g0792 977 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 121 958 - -
Prci6g0792 977 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Prci6g0792 977 Pfam PAN-like domain 322 380 IPR003609 -
Prci6g0792 977 SUPERFAMILY Protein kinase-like (PK-like) 644 953 IPR011009 -
Prci6g0792 977 CDD STKc_IRAK 667 933 - -
Prci6g0792 977 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 626 736 - -
Prci6g0792 977 Gene3D Transferase(Phosphotransferase) domain 1 737 941 - -
Prci6g0792 977 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 737 940 - -
Prci6g0792 977 CDD PAN_AP_plant 315 398 - -
Prci6g0792 977 SMART serkin_6 661 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0792 977 Pfam S-locus glycoprotein domain 232 295 IPR000858 GO:0048544
Prci6g0792 977 ProSiteProfiles Protein kinase domain profile. 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0792 977 MobiDBLite consensus disorder prediction 950 977 - -
Prci6g0792 977 ProSiteProfiles PAN/Apple domain profile. 316 399 IPR003609 -
Prci6g0792 977 Pfam D-mannose binding lectin 75 168 IPR001480 -
Prci6g0792 977 SMART ntp_6 318 398 IPR003609 -
Prci6g0792 977 FunFam Receptor-like serine/threonine-protein kinase SD1-8 20 150 - -
Prci6g0792 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Prci6g0792 977 SMART blect_4 31 153 IPR001480 -
Prci6g0792 977 CDD B_lectin 32 153 IPR001480 -
Prci6g0792 977 Pfam Protein tyrosine and serine/threonine kinase 665 929 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0792 Prci-Chr6 5329696 5334948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0792 648 949 Receptor kinase-like Gene Family AT4G23140 58.766 3.00e-124 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g0792 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0792 - - pcin:129313312 1989.54