Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0790 ATGATAACTGTTGTTCTACTTTATGCTTTTTTACTATGGCTTGCTCCGCCCTGCTTAGCTAGATATGTTTTGAAGATCGGTGAAAACTTAATTGACAGTGAACATTCCAAGCTCGTTTCAGTTGGAAAAAGCTTTGAACTGGGTTTCTTCACCCTTGATGCAAGCTCAAACGGCAAATACCTTGGAATAAGGTATCATAGGTTAGAACAACATACAGTTGTCTGGGTTGCTAACAGGGACAATCCCATCCCAGCTTCAAAAGCTGGAAATTTTCAAATTTCCCAAGATGGAAATCTCATTGTATTAGATACAGAGGGGACACGTTATTGGTCTTCCAGAATCAGACCCGGTCATGCATCTTCTATCGCTAACTCGACAGTGAAGCTTATGGATTCTGGGAACTTAATTCTAGGAGACGATCAATTTCAAGTGACCTACTGGCAAAGCTTCGAACACCCGACGGACACATTCCTGGTGGGCATGAAAATGGATAAAGATTTAGTCTTGACTTCTTGGAAAGCTTCTGATGATCCAGGGAGTGGGGACTTCGCATTCGCAATGGGAAAAACAGGGAACAATCCCTATCAAATATACAGAAACCAGACCCAAGTTTACTGGGCAAGCGAAACACATCCAAATTTCGGTCCAGAAGTACTGCTCAGCAAGATAAGTTTTCTGCTGACTAACTTCACTTCAAAAAATGTTACTTTTGCAAATGAAAGCAGGCCAAGTATTTTACGTCCTTCGAATTATGTTAATACAAGGCTAGTGATGAATTATACAGGAGAGATAAGCCTTCTGAAATGGGATGAGCTTGCCCAGGGATGGTCGCTAGAGTGGCATGAACCCGATCACCAGTGCAAGGTATTTAACATCTGCGGGAAATTCCGCAGTTGCAATATCAAGAACAAGCAATTTGTCTGTAAATGTTTGCCTGGATTCTTTCCTGAGTTGGCGCCGGAGGAGAATCAGATTCAGTCTTCTGTGCCTGGAGAAGTATACAAAGGCTGTATCAGGAATAAAACATCATGTGGGGAAAACACGACAACATTCATAGACCTGAAGAAGGTGAAAGTAAGAAACCCAGACAAACAAGTCGACGCAGCGAATGCAACAGAGTGCCAATCTGAGTGCCTTAGTGATTGCCTCCGTTGCACGGCTTATTCATACAATGCATCAAGAAGTGCCGATCGCAGTAGTAACGCGTGTTTCATTTGGACTTCTGTTTTACCTACTCTTCATAAGTCTCCTGATCAGGGCCTTGATCTTTCTGTCTTGGTAAATAAACAAGATATAGAATCAACAGCAAGAACTTGCAAACCTTGCGGTACAGACACAATTCCTTATCCGCTGAGCACTGAGCTAAGTTGTGGGGATCCCGCTTACTTCAATTTCAACTGTGACTTGTCAACCGGGAATGTTAACTTCATGGTGAGAAAAGATAATTATACAGAAAAAGATAGTTATAGAATTAATTACATTGATCCAGTCTCGAGAACGTTCTCTATCCAATTCGGGGATTCGTCTTCTTGCGCTGCTAGCAATCTTGCGAGCCGGCTTGATCCGTCATTTAGTGTGACTAAACAGTGTGATGGTGAAGGCGAGGTAATGATTAGTTGGTTACCCCCACAAGAACCTCCCTGTAATAACTCCCTCGACTGCAATGCTTGGTCTCATTCAACTTGCAATCCTGCCAGATATGGAGTTGGAAGATGCCTCTGTGCTAAAAACTATCGATGGAATGGCAACGATTTAAGCTGTAAGCCAGTGTCTTCAAGAATCAGGTCTAAAATTTTGATATTAGCAGCGATATTTTCAAGCTTGATTTTCTTGGCTTGCGTTGTACCTACTTATCTTTGGAGAAGAAAAGTAGCCTTTAAGCAAGAAAAGGGAAAAATTCAAAGAACAAGGAAGAGCCTACACGACAGTGAGAGATATCTCAAAGATTTGTTGGATGTCGAGAGATTAGAGGAAAACGACAGTGAAGGGATAGAGGTGCCGTATTTGGATTTTGATAGCATCCTGTTAGCCACAGATAACTTCTCAGATGTGAACAAGCTTGGACGTGGGGGTTATGGACCTGTCTACAAGGGCAAGCTTCCAGGAGGTCAAGATATTGCAGTAAAGAGGCTTTCAAGTGTTTCTTCGCAAGGATTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTTCAACATCGAAACCTTGTCAGACTTCGGGGCTACTGCATAACTGGAGAAGAAAAGATATTACTTTATGAATACATGTCAAACAAGAGCTTGGACACATTCTTATTTGTGGATATATGGCTCCAGAGTATGCATTGGATGGACTTTTCTCAATTAAATCAGATGTTTTTAGTTTTGGGGCATGGAGACTATGGACAAAGAATAACTTGTTGGATTTGA 2412 0.4167 MITVVLLYAFLLWLAPPCLARYVLKIGENLIDSEHSKLVSVGKSFELGFFTLDASSNGKYLGIRYHRLEQHTVVWVANRDNPIPASKAGNFQISQDGNLIVLDTEGTRYWSSRIRPGHASSIANSTVKLMDSGNLILGDDQFQVTYWQSFEHPTDTFLVGMKMDKDLVLTSWKASDDPGSGDFAFAMGKTGNNPYQIYRNQTQVYWASETHPNFGPEVLLSKISFLLTNFTSKNVTFANESRPSILRPSNYVNTRLVMNYTGEISLLKWDELAQGWSLEWHEPDHQCKVFNICGKFRSCNIKNKQFVCKCLPGFFPELAPEENQIQSSVPGEVYKGCIRNKTSCGENTTTFIDLKKVKVRNPDKQVDAANATECQSECLSDCLRCTAYSYNASRSADRSSNACFIWTSVLPTLHKSPDQGLDLSVLVNKQDIESTARTCKPCGTDTIPYPLSTELSCGDPAYFNFNCDLSTGNVNFMVRKDNYTEKDSYRINYIDPVSRTFSIQFGDSSSCAASNLASRLDPSFSVTKQCDGEGEVMISWLPPQEPPCNNSLDCNAWSHSTCNPARYGVGRCLCAKNYRWNGNDLSCKPVSSRIRSKILILAAIFSSLIFLACVVPTYLWRRKVAFKQEKGKIQRTRKSLHDSERYLKDLLDVERLEENDSEGIEVPYLDFDSILLATDNFSDVNKLGRGGYGPVYKGKLPGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGEEKILLYEYMSNKSLDTFLFVDIWLQSMHWMDFSQLNQMFLVLGHGDYGQRITCWI 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0790 803 Pfam D-mannose binding lectin 72 167 IPR001480 -
Prci6g0790 803 CDD B_lectin 29 153 IPR001480 -
Prci6g0790 803 PIRSF SRK 1 447 IPR024171 GO:0004674
Prci6g0790 803 PIRSF SRK 548 779 IPR024171 GO:0004674
Prci6g0790 803 SMART ntp_6 346 427 IPR003609 -
Prci6g0790 803 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Prci6g0790 803 Gene3D - 21 152 IPR036426 -
Prci6g0790 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 647 756 - -
Prci6g0790 803 ProSiteProfiles Protein kinase domain profile. 681 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0790 803 Gene3D Phosphorylase Kinase; domain 1 647 756 - -
Prci6g0790 803 ProSiteProfiles PAN/Apple domain profile. 344 439 IPR003609 -
Prci6g0790 803 SUPERFAMILY Protein kinase-like (PK-like) 663 773 IPR011009 -
Prci6g0790 803 Pfam Protein tyrosine and serine/threonine kinase 685 767 IPR001245 GO:0004672|GO:0006468
Prci6g0790 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 210 IPR036426 -
Prci6g0790 803 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 776 - -
Prci6g0790 803 FunFam Receptor-like serine/threonine-protein kinase SD1-8 17 150 - -
Prci6g0790 803 Pfam S-locus glycoprotein domain 238 317 IPR000858 GO:0048544
Prci6g0790 803 SMART blect_4 29 153 IPR001480 -
Prci6g0790 803 Pfam PAN-like domain 344 409 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0790 Prci-Chr6 5309189 5313948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0790 657 777 Receptor kinase-like Gene Family AT4G23130 57.851 2.13e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g0790 PK_Tyr_Ser-Thr 9.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0790 - - pcin:129313312 670.618