Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0789 ATGATAACTGTTGTTCTACTTTATGCTTTTTTACTATGGCTTGCTCCGCCCTGCTTAGCTAGATATGTTTTGAAGATCGGTGAAAACTTAATTGACAGTGAACATTCCAAGCTCGTTTCAGTTGGAAAAAGCTTTGAACTGGGTTTCTTCACCCTTGATGCAAGCTCAAACGGCAAATACCTTGGAATAAGGTATCATAGGTTAGAACAACATACAGTTGTCTGGGTTGCTAACAGGGACAATCCCATCCCAGCTTCAAAAGCTGGAAATTTTCAAATTTCCCAAGATGGAAATCTCATTGTATTAGATACAGAGGGGACACGTTATTGGTCTTCCAGAATCAGACCCGGTCATGCATCTTCTATCGCTAACTCGACAGTGAAGCTTATGGATTCTGGGAACTTAATTCTAGGAGACGATCAATTTCAAGTGACCTACTGGCAAAGCTTCGAACACCCGACGGACACATTCCTGGTGGGCATGAAAATGGATAAAGATTTAGTCTTGACTTCTTGGAAAGCTTCTGATGATCCAGGGAGTGGGGACTTCGCATTCGCAATGGGAAAAACAGGGAACAATCCCTATCAAATATACAGAAACCAGACCCAAGTTTACTGGGCAAGCGAAACACATCCAAATTTCGGTCCAGAAGTACTGCTCAGCAAGATAAGTTTTCTGCTGACTAACTTCACTTCAAAAAATGTTACTTTTGCAAATGAAAGCAGGCCAAGTATTTTACGTCCTTCGAATTATGTTAATACAAGGCTAGTGATGAATTATACAGGAGAGATAAGCCTTCTGAAATGGGATGAGCTTGCCCAGGGATGGTCGCTAGAGTGGCATGAACCCGATCACCAGTGCAAGGTATTTAACATCTGCGGGAAATTCCGCAGTTGCAATATCAAGAACAAGCAATTTGTCTGTAAATGTTTGCCTGGATTCTTTCCTGAGTTGGCGCCGGAGGAGAATCAGATTCAGTCTTCTGTGCCTGGAGAAGTATACAAAGGCTGTATCAGGAATAAAACATCATGTGGGGAAAACACGACAACATTCATAGACCTGAAGAAGGTGAAAGTAAGAAACCCAGACAAACAAGTCGACGCAGCGAATGCAACAGAGTGCCAATCTGAGTGCCTTAGTGATTGCCTCCGTTGCACGGCTTATTCATACAATGCATCAAGAAGTGCCGATCGCAGTAGTAACGCGTGTTTCATTTGGACTTCTGTTTTACCTACTCTTCATAAGTCTCCTGATCAGGGCCTTGATCTTTCTGTCTTGGTAAATAAACAAGATATAGAATCAACAGCAAGAACTTGCAAACCTTGCGGTACAGACACAATTCCTTATCCGCTGAGCACTGAGCTAAGTTGTGGGGATCCCGCTTACTTCAATTTCAACTGTGACTTGTCAACCGGGAATGTTAACTTCATGGTGAGAAAAGATAATTATACAGAAAAAGATAGTTATAGAATTAATTACATTGATCCAGTCTCGAGAACGTTCTCTATCCAATTCGGGGATTCGTCTTCTTGCGCTGCTAGCAATCTTGCGAGCCGGCTTGATCCGTCATTTAGTGTGACTAAACAGTGTGATGGTGAAGGCGAGGTAATGATTAGTTGGTTACCCCCACAAGAACCTCCCTGTAATAACTCCCTCGACTGCAATGCTTGGTCTCATTCAACTTGCAATCCTGCCAGATATGGAGTTGGAAGATGCCTCTGTGCTAAAAACTATCGATGGAATGGCAACGATTTAAGCTGTAAGCCAGTGTCTTCAAGAATCAGGTCTAAAATTTTGATATTAGCAGCGATATTTTCAAGCTTGATTTTCTTGGCTTGCGTTGTACCTACTTATCTTTGGAGAAGAAAAGTAGCCTTTAAGCAAGAAAAGGGAAAAATTCAAAGAACAAGGAAGAGCCTACACGACAGTGAGAGATATCTCAAAGATTTGTTGGATGTCGAGAGATTAGAGGAAAACGACAGTGAAGGGATAGAGGTGCCGTATTTGGATTTTGATAGCATCCTGTTAGCCACAGATAACTTCTCAGATGTGAACAAGCTTGGACGTGGGGGTTATGGACCTGTCTACAAGGGCAAGCTTCCAGGAGGTCAAGATATTGCAGTAAAGAGGCTTTCAAGTGTTTCTTCGCAAGGATTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTTCAACATCGAAACCTTGTCAGACTTCGGGGCTACTGCATAACTGGAGAAGAAAAGATATTACTTTATGAATACATGTCAAACAAGAGCTTGGACACATTCTTATTTGATCGTACACAAAGAATGATTTTGGATTGGCCAATGCGATTTGACATAATTCTAGGAGTTGCTAGAGGGATATTATATCTTCACCAAGACTCTAGGTTGAAGGTGATTCATAGAGATTTGAAAACAAGTAATATTCTTTTAAATGAGGATATGCAACCAAAAATTTCAGACTTTGGACTCGCAAAAATATTTGGTAGCAAGGAGACAGAGGCTAATACTGAGAGAATAGTTGGAACTTATGGATATATGGCTCCAGAGTATGCATTGGATGGACTTTTCTCAATTAAATCAGATGTTTTTAGTTTTGGGGTAATAATGCTTGAAATTATTAGCGGAAGAAAGAACACAGGATTCTTTCAATCCAAGCAAGCTTCCAGCCTACTTGGTTTTGCATGGAGACTATGGACAAAGAATAACTTGTTGGATTTGATGGATCAATCTCTAAGTGGAAGTTGCAATGCAAACCAATTTGTTAAGTGTGCACAAGTTAGTCTATTGTGTGTACAAGATGAACCAGGAGACAGACCCACCATGTCACAAGTTTTGATAATGCTTGAAAGTGAGATTGCAAGCCTCCCAACCCCAAAGCAACCAACCTTTTTTATGACCAGTGCCAGGGGCCTTTCAAGCTCTACTTCTTCTAGTAAACCTGAAGGAATTCTTCCAACTGATAGTTCCTATCAAGAGAGTCGGTAG 2997 0.4107 MITVVLLYAFLLWLAPPCLARYVLKIGENLIDSEHSKLVSVGKSFELGFFTLDASSNGKYLGIRYHRLEQHTVVWVANRDNPIPASKAGNFQISQDGNLIVLDTEGTRYWSSRIRPGHASSIANSTVKLMDSGNLILGDDQFQVTYWQSFEHPTDTFLVGMKMDKDLVLTSWKASDDPGSGDFAFAMGKTGNNPYQIYRNQTQVYWASETHPNFGPEVLLSKISFLLTNFTSKNVTFANESRPSILRPSNYVNTRLVMNYTGEISLLKWDELAQGWSLEWHEPDHQCKVFNICGKFRSCNIKNKQFVCKCLPGFFPELAPEENQIQSSVPGEVYKGCIRNKTSCGENTTTFIDLKKVKVRNPDKQVDAANATECQSECLSDCLRCTAYSYNASRSADRSSNACFIWTSVLPTLHKSPDQGLDLSVLVNKQDIESTARTCKPCGTDTIPYPLSTELSCGDPAYFNFNCDLSTGNVNFMVRKDNYTEKDSYRINYIDPVSRTFSIQFGDSSSCAASNLASRLDPSFSVTKQCDGEGEVMISWLPPQEPPCNNSLDCNAWSHSTCNPARYGVGRCLCAKNYRWNGNDLSCKPVSSRIRSKILILAAIFSSLIFLACVVPTYLWRRKVAFKQEKGKIQRTRKSLHDSERYLKDLLDVERLEENDSEGIEVPYLDFDSILLATDNFSDVNKLGRGGYGPVYKGKLPGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGEEKILLYEYMSNKSLDTFLFDRTQRMILDWPMRFDIILGVARGILYLHQDSRLKVIHRDLKTSNILLNEDMQPKISDFGLAKIFGSKETEANTERIVGTYGYMAPEYALDGLFSIKSDVFSFGVIMLEIISGRKNTGFFQSKQASSLLGFAWRLWTKNNLLDLMDQSLSGSCNANQFVKCAQVSLLCVQDEPGDRPTMSQVLIMLESEIASLPTPKQPTFFMTSARGLSSSTSSSKPEGILPTDSSYQESR 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0789 998 CDD STKc_IRAK 687 953 - -
Prci6g0789 998 CDD B_lectin 29 153 IPR001480 -
Prci6g0789 998 SMART ntp_6 346 427 IPR003609 -
Prci6g0789 998 FunFam Receptor-like serine/threonine-protein kinase SD1-8 17 150 - -
Prci6g0789 998 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Prci6g0789 998 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 647 756 - -
Prci6g0789 998 SUPERFAMILY Protein kinase-like (PK-like) 664 981 IPR011009 -
Prci6g0789 998 ProSiteProfiles PAN/Apple domain profile. 344 439 IPR003609 -
Prci6g0789 998 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 757 960 - -
Prci6g0789 998 SMART serkin_6 681 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0789 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Prci6g0789 998 MobiDBLite consensus disorder prediction 972 998 - -
Prci6g0789 998 CDD PAN_AP_plant 343 427 - -
Prci6g0789 998 Gene3D - 21 151 IPR036426 -
Prci6g0789 998 Pfam PAN-like domain 344 409 IPR003609 -
Prci6g0789 998 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 210 IPR036426 -
Prci6g0789 998 Pfam D-mannose binding lectin 72 167 IPR001480 -
Prci6g0789 998 Gene3D Phosphorylase Kinase; domain 1 647 756 - -
Prci6g0789 998 Pfam S-locus glycoprotein domain 238 317 IPR000858 GO:0048544
Prci6g0789 998 Gene3D Transferase(Phosphotransferase) domain 1 757 961 - -
Prci6g0789 998 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 124 977 - -
Prci6g0789 998 ProSiteProfiles Protein kinase domain profile. 681 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0789 998 SMART blect_4 29 153 IPR001480 -
Prci6g0789 998 Pfam Protein tyrosine and serine/threonine kinase 685 949 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0789 Prci-Chr6 5308905 5313946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0789 656 974 Receptor kinase-like Gene Family AT4G23150 56.426 3.75e-123 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g0789 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0789 - - pcin:129313312 1047.73