Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0788 ATGATAACTGTTGTTCTACTTTATGCTTTTTTACTATGGCTTGCTCCGCCCTGCTTAGCTAGATATGTTTTGAAGATCGGTGAAAACTTAATTGACAGTGAACATTCCAAGCTCGTTTCAGTTGGAAAAAGCTTTGAACTGGGTTTCTTCACCCTTGATGCAAGCTCAAACGGCAAATACCTTGGAATAAGGTATCATAGGTTAGAACAACATACAGTTGTCTGGGTTGCTAACAGGGACAATCCCATCCCAGCTTCAAAAGCTGGAAATTTTCAAATTTCCCAAGATGGAAATCTCATTGTATTAGATACAGAGGGGACACGTTATTGGTCTTCCAGAATCAGACCCGGTCATGCATCTTCTATCGCTAACTCGACAGTGAAGCTTATGGATTCTGGGAACTTAATTCTAGGAGACGATCAATTTCAAGTGACCTACTGGCAAAGCTTCGAACACCCGACGGACACATTCCTGGTGGGCATGAAAATGGATAAAGATTTAGTCTTGACTTCTTGGAAAGCTTCTGATGATCCAGGGAGTGGGGACTTCGCATTCGCAATGGGAAAAACAGGGAACAATCCCTATCAAATATACAGAAACCAGACCCAAGTTTACTGGGCAAGCGAAACACATCCAAATTTCGGTCCAGAAGTACTGCTCAGCAAGATAAGTTTTCTGCTGACTAACTTCACTTCAAAAAATGTTACTTTTGCAAATGAAAGCAGGCCAAGTATTTTACGTCCTTCGAATTATGTTAATACAAGGCTAGTGATGAATTATACAGGAGAGATAAGCCTTCTGAAATGGGATGAGCTTGCCCAGGGATGGTCGCTAGAGTGGCATGAACCCGATCACCAGTGCAAGGTATTTAACATCTGCGGGAAATTCCGCAGTTGCAATATCAAGAACAAGCAATTTGTCTGTAAATGTTTGCCTGGATTCTTTCCTGAGTTGGCGCCGGAGGAGAATCAGATTCAGTCTTCTGTGCCTGGAGAAGTATACAAAGGCTGTATCAGGAATAAAACATCATGTGGGGAAAACACGACAACATTCATAGACCTGAAGAAGGTGAAAGTAAGAAACCCAGACAAACAAGTCGACGCAGCGAATGCAACAGAGTGCCAATCTGAGTGCCTTAGTGATTGCCTCCGTTGCACGGCTTATTCATACAATGCATCAAGAAGTGCCGATCGCAGTAGTAACGCGTGTTTCATTTGGACTTCTGTTTTACCTACTCTTCATAAGTCTCCTGATCAGGGCCTTGATCTTTCTGTCTTGGTAAATAAACAAGATATAGAATCAACAGCAAGAACTTGCAAACCTTGCGGTACAGACACAATTCCTTATCCGCTGAGCACTGAGCTAAGTTGTGGGGATCCCGCTTACTTCAATTTCAACTGTGACTTGTCAACCGGGAATGTTAACTTCATGGTGAGAAAAGATAATTATACAGAAAAAGATAGTTATAGAATTAATTACATTGATCCAGTCTCGAGAACGTTCTCTATCCAATTCGGGGATTCGTCTTCTTGCGCTGCTAGCAATCTTGCGAGCCGGCTTGATCCGTCATTTAGTGTGACTAAACAGTGTGATGGTGAAGGCGAGGTAATGATTAGTTGGTTACCCCCACAAGAACCTCCCTGTAATAACTCCCTCGACTGCAATGCTTGGTCTCATTCAACTTGCAATCCTGCCAGATATGGAGTTGGAAGATGCCTCTGTGCTAAAAACTATCGATGGAATGGCAACGATTTAAGCTGTAAGCCAGTGTCTTCAAGAATCAGGTCTAAAATTTTGATATTAGCAGCGATATTTTCAAGCTTGATTTTCTTGGCTTGCGTTGTACCTACTTATCTTTGGAGAAGAAAAGTAGCCTTTAAGCAAGAAAAGGGAAAAATTCAAAGAACAAGGAAGAGCCTACACGACAGTGAGAGATATCTCAAAGATTTGTTGGATGTCGAGAGATTAGAGGAAAACGACAGTGAAGGGATAGAGGTGCCGTATTTGGATTTTGATAGCATCCTGTTAGCCACAGATAACTTCTCAGATGTGAACAAGCTTGGACGTGGGGGTTATGGACCTGTCTACAAGGGCAAGCTTCCAGGAGGTCAAGATATTGCAGTAAAGAGGCTTTCAAGTGTTTCTTCGCAAGGATTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTTCAACATCGAAACCTTGTCAGACTTCGGGGCTACTGCATAACTGGAGAAGAAAAGATATTACTTTATGAATACATGTCAAACAAGAGCTTGGACACATTCTTATTTGATCGTACACAAAGAATGATTTTGGATTGGCCAATGCGATTTGACATAATTCTAGGAGTTGCTAGAGGGATATTATATCTTCACCAAGACTCTAGGTTGAAGGTGATTCATAGAGATTTGAAAACAAGTAATATTCTTTTAAATGAGGATATGCAACCAAAAATTTCAGACTTTGGACTCGCAAAAATATTTGGTAGCAAGGAGACAGAGGCTAATACTGAGAGAATAGTTGGAACTTATGGATATATGGCTCCAGAGTATGCATTGGATGGACTTTTCTCAATTAAATCAGATGTTTTTAGTTTTGGGGCATGGAGACTATGGACAAAGAATAACTTGTTGGATTTGATGGATCAATCTCTAAGTGGAAGTTGCAATGCAAACCAATTTGTTAAGTGTGCACAAGTTAGTCTATTGTGTGTACAAGATGAACCAGGAGACAGACCCACCATGTCACAAGTTTTGATAATGCTTGAAAGTGAGATTGCAAGCCTCCCAACCCCAAAGCAACCAACCTTTTTTATGACCAGTGCCAGGGGCCTTTCAAGCTCTACTTCTTCTAGTAAACCTGAAGGAATTCTTCCAACTGATAGTTCCTATCAAGAGAGTCGGTAG 2916 0.4119 MITVVLLYAFLLWLAPPCLARYVLKIGENLIDSEHSKLVSVGKSFELGFFTLDASSNGKYLGIRYHRLEQHTVVWVANRDNPIPASKAGNFQISQDGNLIVLDTEGTRYWSSRIRPGHASSIANSTVKLMDSGNLILGDDQFQVTYWQSFEHPTDTFLVGMKMDKDLVLTSWKASDDPGSGDFAFAMGKTGNNPYQIYRNQTQVYWASETHPNFGPEVLLSKISFLLTNFTSKNVTFANESRPSILRPSNYVNTRLVMNYTGEISLLKWDELAQGWSLEWHEPDHQCKVFNICGKFRSCNIKNKQFVCKCLPGFFPELAPEENQIQSSVPGEVYKGCIRNKTSCGENTTTFIDLKKVKVRNPDKQVDAANATECQSECLSDCLRCTAYSYNASRSADRSSNACFIWTSVLPTLHKSPDQGLDLSVLVNKQDIESTARTCKPCGTDTIPYPLSTELSCGDPAYFNFNCDLSTGNVNFMVRKDNYTEKDSYRINYIDPVSRTFSIQFGDSSSCAASNLASRLDPSFSVTKQCDGEGEVMISWLPPQEPPCNNSLDCNAWSHSTCNPARYGVGRCLCAKNYRWNGNDLSCKPVSSRIRSKILILAAIFSSLIFLACVVPTYLWRRKVAFKQEKGKIQRTRKSLHDSERYLKDLLDVERLEENDSEGIEVPYLDFDSILLATDNFSDVNKLGRGGYGPVYKGKLPGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGEEKILLYEYMSNKSLDTFLFDRTQRMILDWPMRFDIILGVARGILYLHQDSRLKVIHRDLKTSNILLNEDMQPKISDFGLAKIFGSKETEANTERIVGTYGYMAPEYALDGLFSIKSDVFSFGAWRLWTKNNLLDLMDQSLSGSCNANQFVKCAQVSLLCVQDEPGDRPTMSQVLIMLESEIASLPTPKQPTFFMTSARGLSSSTSSSKPEGILPTDSSYQESR 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0788 971 Pfam D-mannose binding lectin 72 167 IPR001480 -
Prci6g0788 971 SUPERFAMILY Protein kinase-like (PK-like) 667 955 IPR011009 -
Prci6g0788 971 Pfam S-locus glycoprotein domain 238 317 IPR000858 GO:0048544
Prci6g0788 971 CDD B_lectin 29 153 IPR001480 -
Prci6g0788 971 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 128 950 - -
Prci6g0788 971 SMART ntp_6 346 427 IPR003609 -
Prci6g0788 971 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Prci6g0788 971 Gene3D Phosphorylase Kinase; domain 1 647 756 - -
Prci6g0788 971 ProSiteProfiles PAN/Apple domain profile. 344 439 IPR003609 -
Prci6g0788 971 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 210 IPR036426 -
Prci6g0788 971 Pfam Protein tyrosine and serine/threonine kinase 685 922 IPR001245 GO:0004672|GO:0006468
Prci6g0788 971 ProSiteProfiles Protein kinase domain profile. 681 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0788 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Prci6g0788 971 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 647 756 - -
Prci6g0788 971 Gene3D Transferase(Phosphotransferase) domain 1 757 934 - -
Prci6g0788 971 Pfam PAN-like domain 344 409 IPR003609 -
Prci6g0788 971 FunFam Receptor-like serine/threonine-protein kinase SD1-8 17 150 - -
Prci6g0788 971 MobiDBLite consensus disorder prediction 945 971 - -
Prci6g0788 971 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 757 871 - -
Prci6g0788 971 CDD STKc_IRAK 687 926 - -
Prci6g0788 971 SMART serkin_6 681 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0788 971 SMART blect_4 29 153 IPR001480 -
Prci6g0788 971 Gene3D - 21 151 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0788 Prci-Chr6 5308905 5313947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0788 652 946 Receptor kinase-like Gene Family AT4G05200 50.000 2.23e-108 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g0788 PK_Tyr_Ser-Thr 2.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0788 - - pcin:129313312 987.252