Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0787 ATGGGAAACACAGGGATAAAGATCAGAAGGAAAATAATGCTCAACCAGTCTGCAAATCACATGCTGCCAGTATTCTTTTTGCATGCATTGTTTTTCACTTTTATGCATTGCTCTGCTAGGGATACCATAAGCATTAACAATTCCTTGAGTGAAAGGGAAGGGGATACTCTTATTTCCGCTGGAGAAAGATTTGAACTAGGATTCTTCACCCTTAATGGAAGCTCTGGTGGTGGAAAATATGTGGGAATATGGTACTACGAGTCAAATCCACCCACAGTTGTGTGGGTTGCTAACCGAGACAATCCGCTTTCTGATGCTGGTGGTGTTCTTATCATAGCTGAGGACGGCAATCTCAGAGTTTTGGATGGAAGTCGGAGATCTTACTGGGGTACAAATCTTGAAATGTCATCGTCAGAGCACAGGACTGCTAAGCTAATGGATAATGGAAATCTTATCATGAGTGATGAAGAACAAGGAAGTCACTCGGTGAAGATCGTCTGGCAGAGTTTTGCAAATCCAACAGATACATTTCTCCCAGGCATGAAAATGGATGAGAATTTTGTGCTTACTTCTTGGAGAAGTCATGATGATCCAGCGCCAGGGAACTTCTCATTTCGGCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCTATCAGGTATTGGATAAGCAGTGCGACCGGTACGTTTTCTGGGTCAGGTGAAATGTCTTCTGTAATATCTTACTTGCTGTCGAATTTCACCCAGAGAATATCTCCAAATAACTCTGTACCCTTTCTGACTTCATCTCTGTATGGCGACACAAGGCTGGTTATGACTTACTCTGGTCAGCTTCAGTATTTGAAGATGGATTCACAGAAAGTTTGGTCCTTGGTTTGGGCAGAGCCACGAGATAGATGCAGCGTGTATAATGCTTGTGGTACCTTTGGCAGCTGCAATAGGCGGGGTGCTAGTGGTGATGCAGTGTGCTGGATTTGGACTGAAGACTTGAACAATCTTCAAGAGGAGTATGAGCATGGATGTGATCTCCATGTGCGCGTGGCATATTATGATATAGCATCCAATTGCAGGACCTGTAGGACTTGTGGTACAAACTTCATTCCATATCCACTTAGCACAGGAGCACGTTGTGGCGATCCCATGTACCTCAGTTTCCACTGTAACGTCACTACAGGAGAGCTTAGCTTTGAAACTCCTGGGGGCGCTTATCAAGTGATAAGCATAACACCTGAAACGCAAAAATTCATGATTCGCAGCAGAGACATAATTGATTGTGAGGGTCAAAGTTTGAGGGACAAGCTTCTGCGTCCAAACCAGTCATCTCCTTTTCATCTAACTGGCAGGTGTAACGCTGAACCAAGCACCCTTAATCCTATTGCTCCTGCCAAACTTGGTGGGGAAATAGAAATGAGCTGGGATCCACCATTAGAGCCGCTTTGTCGTTCTTTTTCAGACTGTAAGGACTGGCCAAACTCAATTTGCAATACTTCCAGAGATGGGGAAAAGAGATGTCTTTGCAAAACAAACTTTCTTTGGGATGGCTTGATTTTAAATTGTACCTTTGAAGGCAGCCATAGCAATCAAACAGGCAGGCGTTTGTCTGTTCCTTTGATTATTGCAGTCACTTTCACTATTGTGAGTGTGTTAATTCTCCCATCAAGTACTGTAACCTATGTTTACTTTCGGAGGAGAAGGCTGACCAAGGCAAAAGAAATCAAGGTGTATATTAAGAAAAATTCAGCAAGGAGTCTGTATGACAGTGAGAGATATGTCAAAGATTTGATTGAATCGGGTAGGTTCAAAGAAGATGATGGACATGCCATAGACATCCCACATTTTCATTTGGAAAGCATACTTGACGCTACCACTAACTTTTCAAGTGCAAACAAGCTTGGACAAGGAGGATTCGGTCCTGTCTACAAGGGGAAGTTTCAAGGAGGACAAGAGATAGCTGTGAAGAGACTCTCGAGTTGCTCTGGACAAGGCTTAGAAGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATCGAAACTTGGTTAGGCTTCTCGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTGTATGAATATATGCCAAATAGAAGTCTAGATTTTTTCATATTTGACCGGAAATCATGTGTTGTATTAGATTGGGGCAAGCGTTTCAAGATTATTTTGGGGATTGCTCGAGGGCTTCTTTACCTTCATCAAGACTCAAGGCTAAGAATCATTCATAGAGACTTGAAAACAAGCAATATTCTACTAGATGAAGAAATGAATCCTAAAATCTCTGATTTTGGCTTAGCTAGGATCTTTGGAGGAAAAGAAACAGCAGCAAACACAAACAGAGTGGTTGGAACTTATGGCTACATGTCTCCAGAATATGCACTTGATGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTTGGCGTGGTGGTACTTGAGATTCTTAGTGGAAAAAGGAACACAGGATTTTACCAGGCAGATCATGAATTGAGTCTTTTAGGCTATGCGTGGCATTTATGGAAAGTAGGAAGAGCGCTGGATTTTATGGATCAGACACTATCTCAGACAGGCAAAACTGATGAATATTTGAAGTGCGTGAATGTTGGATTGCTATGCGTACAGGAAGATCCAAATGACCGTCCCACCATGTCCAATGTAGTTTTCATGCTTGGAAGTGATTCAAGTACTCTTCCTACTCCCAAGCAGCCAGCCTTTGTTGTTAGAAGATGCCCTTCTAGCAGAGCTTCTACTACCAGTAAAATGGAATCTTGTTCACATAATGAATTGACTGTCACTTTAGAAAAAGGTAGGTAG 2838 0.4204 MGNTGIKIRRKIMLNQSANHMLPVFFLHALFFTFMHCSARDTISINNSLSEREGDTLISAGERFELGFFTLNGSSGGGKYVGIWYYESNPPTVVWVANRDNPLSDAGGVLIIAEDGNLRVLDGSRRSYWGTNLEMSSSEHRTAKLMDNGNLIMSDEEQGSHSVKIVWQSFANPTDTFLPGMKMDENFVLTSWRSHDDPAPGNFSFRQDQGENQYIIWKRSIRYWISSATGTFSGSGEMSSVISYLLSNFTQRISPNNSVPFLTSSLYGDTRLVMTYSGQLQYLKMDSQKVWSLVWAEPRDRCSVYNACGTFGSCNRRGASGDAVCWIWTEDLNNLQEEYEHGCDLHVRVAYYDIASNCRTCRTCGTNFIPYPLSTGARCGDPMYLSFHCNVTTGELSFETPGGAYQVISITPETQKFMIRSRDIIDCEGQSLRDKLLRPNQSSPFHLTGRCNAEPSTLNPIAPAKLGGEIEMSWDPPLEPLCRSFSDCKDWPNSICNTSRDGEKRCLCKTNFLWDGLILNCTFEGSHSNQTGRRLSVPLIIAVTFTIVSVLILPSSTVTYVYFRRRRLTKAKEIKVYIKKNSARSLYDSERYVKDLIESGRFKEDDGHAIDIPHFHLESILDATTNFSSANKLGQGGFGPVYKGKFQGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDFFIFDRKSCVVLDWGKRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETAANTNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNTGFYQADHELSLLGYAWHLWKVGRALDFMDQTLSQTGKTDEYLKCVNVGLLCVQEDPNDRPTMSNVVFMLGSDSSTLPTPKQPAFVVRRCPSSRASTTSKMESCSHNELTVTLEKGR 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0787 945 ProSiteProfiles Bulb-type lectin domain profile. 42 166 IPR001480 -
Prci6g0787 945 SMART blect_4 48 173 IPR001480 -
Prci6g0787 945 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 170 - -
Prci6g0787 945 Pfam D-mannose binding lectin 92 188 IPR001480 -
Prci6g0787 945 ProSiteProfiles Protein kinase domain profile. 627 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0787 945 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 592 702 - -
Prci6g0787 945 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 138 924 - -
Prci6g0787 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Prci6g0787 945 CDD STKc_IRAK 633 898 - -
Prci6g0787 945 SUPERFAMILY Protein kinase-like (PK-like) 610 898 IPR011009 -
Prci6g0787 945 Pfam S-locus glycoprotein domain 230 317 IPR000858 GO:0048544
Prci6g0787 945 Gene3D Transferase(Phosphotransferase) domain 1 703 907 - -
Prci6g0787 945 CDD B_lectin 46 173 IPR001480 -
Prci6g0787 945 PIRSF SRK 13 371 IPR024171 GO:0004674
Prci6g0787 945 PIRSF SRK 481 945 IPR024171 GO:0004674
Prci6g0787 945 Gene3D - 35 172 IPR036426 -
Prci6g0787 945 Gene3D Phosphorylase Kinase; domain 1 593 702 - -
Prci6g0787 945 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 703 906 - -
Prci6g0787 945 Pfam Domain of unknown function (DUF3403) 900 945 IPR021820 GO:0004674
Prci6g0787 945 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 198 IPR036426 -
Prci6g0787 945 SMART serkin_6 627 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g0787 945 Pfam Protein tyrosine and serine/threonine kinase 630 896 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0787 Prci-Chr6 5280922 5287011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0787 606 916 Receptor kinase-like Gene Family AT4G23230 59.744 2.07e-126 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g0787 PK_Tyr_Ser-Thr 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0787 - - fve:101303888 1015.76