Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0778 ATGAAAACTGAGTTAAAAGGAAGCACTACTTCCATTTCCCTCCAATATCCAACTCTCTTCAACGCACCGCACAATAATCCTGATATCTCAGGAGCACTCAAAGGCTGCCTCGGGAGCCTCGATGGAGGTTGTATAGAGAAGCTCTTGCTTCACTGTGCCAGTGCTTTAGAGAGCAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTGCTCAATAATGTCGCTTCTCCAGTTGGCGACACCAACCAAAGGCTCACCTCGTGGTTTCTCAGAGCCTTAATCTCTAGGGCTTCACGAGTCTGCCCCATGAACTTCAACGGGAGAAGCAGTACCATCCAGAGAAGGTTGATGTCCGTGACAGAGCTTGCAGGGTACGTTGATCTTATCCCTTGGCATAGGTTTGGGTTTTGTGCTTCCAATAGTGCTATTCTTAAAGCAATTCATGGATTCCAAAGAGTGCACATACTAGATTTTAGCATTACCCATTGTATGCAGTGGCCTACACTTATAGATGCCTTGGCCAAAAGGCCTGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTGTAGGCCATCTGTCCCACCTTTGGTCAATATTTCAATAGAACAAGTTGGGCTGCGCCTGGGGAATTTTGCTAAGTTCAGGGAGGTCCTTTTTGAGTTTAATGTGATTCGAAGGAGCGCATCTTCTGAATTGAGCAATGTTAATAATGATTCATCCTGCTTTCCCTTTGAGTCATTGTTAAGTCACCTGAATCCCGCTACGTTAAATCTTAGGGAAGACGAAGCTTTGGTGATAAATTGTCAAAATTGGCTACGTTACTTGTCCGATGAAAGAAAGGAGAGTTTCCAAGATGCGTCCCCTAGGGATACTTTCATAAATCTAATTAAAAGTCTTAACCCTAGAATAGTACTATTGGTTGATGAGGATTGTGATCTTAGTGTCCCAAGTCTCACGTCAAGAATCACCACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACCTTTTTGCCTAAAGACAGCAACCACAGGGTAGAGTATGAATCTGACATAGGCCAGAAAATTGAGAACATCATCAGCTTCGAGGGGGTTCAGAGAATAGAGAGATTAGAAAGTGGGGCGAAAATGTCGCAAAGGATGAAAAACGGAGGCTTCTTCAACGTTCCATTTTGTGAAGAAACCGTGAGAGATGTTAAGGCTTTGCTTGATGAGCATGCTAGTGGATGGGGAATGAAGAGAGAAGAAGATATGTTGGTCCTCACATGGAAAGGCCATAACTCTGTAATCGCCACAGCTTGGGTCCCCAGTGAGTTAAGCGATCATATGGGTGTGGGCTGA 1350 0.4437 MKTELKGSTTSISLQYPTLFNAPHNNPDISGALKGCLGSLDGGCIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRVCPMNFNGRSSTIQRRLMSVTELAGYVDLIPWHRFGFCASNSAILKAIHGFQRVHILDFSITHCMQWPTLIDALAKRPEGPPEVKITVPSCRPSVPPLVNISIEQVGLRLGNFAKFREVLFEFNVIRRSASSELSNVNNDSSCFPFESLLSHLNPATLNLREDEALVINCQNWLRYLSDERKESFQDASPRDTFINLIKSLNPRIVLLVDEDCDLSVPSLTSRITTCFNYLWIPFDALETFLPKDSNHRVEYESDIGQKIENIISFEGVQRIERLESGAKMSQRMKNGGFFNVPFCEETVRDVKALLDEHASGWGMKREEDMLVLTWKGHNSVIATAWVPSELSDHMGVG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0778 449 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 433 IPR005202 -
Prci6g0778 449 Pfam GRAS domain family 46 437 IPR005202 -
Prci6g0778 449 ProSiteProfiles GRAS family profile. 36 438 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0778 Prci-Chr6 5203324 5205762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0778 17 439 GRAS Transcription Factor Family AT3G49950 46.420 3.50e-125 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci6g0778 GRAS 6.7e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0778 - - qsa:O6P43_000622 703.36