Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0768 ATGGAACCTCTATGTGATCTTTGTGGGTTCGTAAGAGCAGTGGTCTACTGCGAGTCAGATTCTGCTCGTCTATGCTTGAACTGCGACTGTCGTGTACACTCTGCGAATGCTCTGTCACACCGTCATCCTCGTTCACTCCTCTGTGATAACTGCAATTGCCAGCCCGCAATTGTCCGCTGCATGTATGATGAAATGTCTGTGTGTCAATCTTGTGACTGGAACCAAATTGGCTGTTCACGATTGGGCCATCGGTCTCAGGCATTAAGTTCTTACACGGGTTGTCCCTCTTCGGCAGAGTTCTCAAAAATATGGTCCTTTGTCCTTGATGCTCCTTCTTCAGGCGGTCTTGGTGTTGCTGCCCCTCGATCATTTACCACATTGCCTAGAAATGACAGCTGCTCATCAAGCAAGTGTTTGGAGCAACCAGATAACGATACCTCCTTTGATTTGGTGACTGGTAAGGTGAATGAAATAGAACCATGTGTCAAATATGATCCTTGGATGGGACAATCTTCTAATATTATACCACCCAACACAAATTTCCTGTCATCGTGCAGAGACCAACCATTTTCATTTCCCCTTGGTTCCGACCTGGCGAAGGAATGTCCCAATTTAAAGGATTTTGGAACTGCTAGTGGTGATGGTCTCTGTGCAGGTCTCAACATAGCAGATCTTTCATTCAGCCTCGAAAGTGATGATGAAATACTTGATTACACTCAAGAAGCCACCAGAAACCATGCTGAGAATAATGGAGAAATTGACTGTTTATTAATGGGAAAGAACATATCAGTTCCCGAACCTAACGGTCTTATTGAGAATGCCTTAGAGGCATCTTCATCAGTTCAACAAGATTGCGCAGCCTTTCAATCATCCAGGCCAAGCGGGTCAGTTAACATGGGGCACACCATCAACAGTAATGCAAATCCTATCTCCATGAATCTGAGCTGCAACCAAAACGTCAATCTAGGATATCCTCATGGTCAAGTGCATCCAAGCATATCAGCCTCATTATCAAACATTAGTGGTGAAAATAGTGCCCCTGATTATCAAGATTGTGGATTATCACCAACATTCCTGACAGGTGTCAGCCGGTGGGAGCCAAATTTTGGGTCCTCGTGCCCACAAGCAAGGGACAAAGCTAAAATGAGGTTTAGTAGACAAATAAGATATGCGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGGGTGAAAGGTAGATTTGTGAAAGCTGGTGAAGCACATGATTATGATCCTCAAGTGACAGGGAACTTCTAA 1275 0.4455 MEPLCDLCGFVRAVVYCESDSARLCLNCDCRVHSANALSHRHPRSLLCDNCNCQPAIVRCMYDEMSVCQSCDWNQIGCSRLGHRSQALSSYTGCPSSAEFSKIWSFVLDAPSSGGLGVAAPRSFTTLPRNDSCSSSKCLEQPDNDTSFDLVTGKVNEIEPCVKYDPWMGQSSNIIPPNTNFLSSCRDQPFSFPLGSDLAKECPNLKDFGTASGDGLCAGLNIADLSFSLESDDEILDYTQEATRNHAENNGEIDCLLMGKNISVPEPNGLIENALEASSSVQQDCAAFQSSRPSGSVNMGHTINSNANPISMNLSCNQNVNLGYPHGQVHPSISASLSNISGENSAPDYQDCGLSPTFLTGVSRWEPNFGSSCPQARDKAKMRFSRQIRYASRKARADTRKRVKGRFVKAGEAHDYDPQVTGNF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0768 424 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci6g0768 424 CDD Bbox1_BBX-like 4 47 - -
Prci6g0768 424 ProSiteProfiles CCT domain profile. 368 410 IPR010402 GO:0005515
Prci6g0768 424 Pfam CCT motif 381 410 IPR010402 GO:0005515
Prci6g0768 424 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0768 Prci-Chr6 5121291 5124438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0768 1 418 C2C2-CO-like Transcription Factor Family AT3G21880 39.302 1.48e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Prci6g0768 CCT 3.6e-09 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0768 - - qsa:O6P43_028700 485.723