Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0767 ATGGAACCTCTATGTGATCTTTGTGGGTTCGTAAGAGCAGTGGTCTACTGCGAGTCAGATTCTGCTCGTCTATGCTTGAACTGCGACTGTCGTGTACACTCTGCGAATGCTCTGTCACACCGTCATCCTCGTTCACTCCTCTGTGATAACTGCAATTGCCAGCCCGCAATTGTCCGCTGCATGTATGATGAAATGTCTGTGTGTCAATCTTGTGACTGGAACCAAATTGGCTGTTCACGATTGGGCCATCGGTCTCAGGCATTAAGTTCTTACACGGGTTGTCCCTCTTCGGCAGAGTTCTCAAAAATATGGTCCTTTGTCCTTGATGCTCCTTCTTCAGGCGGTCTTGGTGTTGCTGCCCCTCGATCATTTACCACATTGCCTAGAAATGACAGCTGCTCATCAAGCAAGTGTTTGGAGCAACCAGATAACGATACCTCCTTTGATTTGGTGACTGGTAAGGTGAATGAAATAGAACCATGTGTCAAATATGATCCTTGGATGGGACAATCTTCTAATATTATACCACCCAACACAAATTTCCTGTCATCGTGCAGAGACCAACCATTTTCATTTCCCCTTGGTTCCGACCTGGCGAAGGAATGTCCCAATTTAAAGGATTTTGGAACTGCTAGTGGTGATGGTCTCTGTGCAGGTCTCAACATAGCAGATCTTTCATTCAGCCTCGAAAGTGATGATGAAATACTTGATTACACTCAAGAAGCCACCAGAAACCATGCTGAGAATAATGGAGAAATTGACTGTTTATTAATGGGAAAGAACATATCAGTTCCCGAACCTAACGGTCTTATTGAGAATGCCTTAGAGGCATCTTCATCAGTTCAACAAGATTGCGCAGCCTTTCAATCATCCAGGCCAAGCGGGTCAGTTAACATGGGGCACACCATCAACAGTAATGCAAATCCTATCTCCATGAATCTGAGCTGCAACCAAAACGTCAATCTAGGATATCCTCATGGTCAAGTGCATCCAAGCATATCAGCCTCATTATCAAACATTAGTGGTGAAAATAGTGCCCCTGATTATCAAGATTGTGGATTATCACCAACATTCCTGACAGGTGTCAGCCGGTGGGAGCCAAATTTTGGGTCCTCGTGCCCACAAGCAAGGGACAAAGCTAAAATGAGGTACAACGAGAAGAAGAAAACCAGGACGTTTAGTAGACAAATAAGATATGCGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGGGTGAAAGGTAGATTTGTGAAAGCTGGTGAAGCACATGATTATGATCCTCAAGTGACAGGGAACTTCTAA 1302 0.4455 MEPLCDLCGFVRAVVYCESDSARLCLNCDCRVHSANALSHRHPRSLLCDNCNCQPAIVRCMYDEMSVCQSCDWNQIGCSRLGHRSQALSSYTGCPSSAEFSKIWSFVLDAPSSGGLGVAAPRSFTTLPRNDSCSSSKCLEQPDNDTSFDLVTGKVNEIEPCVKYDPWMGQSSNIIPPNTNFLSSCRDQPFSFPLGSDLAKECPNLKDFGTASGDGLCAGLNIADLSFSLESDDEILDYTQEATRNHAENNGEIDCLLMGKNISVPEPNGLIENALEASSSVQQDCAAFQSSRPSGSVNMGHTINSNANPISMNLSCNQNVNLGYPHGQVHPSISASLSNISGENSAPDYQDCGLSPTFLTGVSRWEPNFGSSCPQARDKAKMRYNEKKKTRTFSRQIRYASRKARADTRKRVKGRFVKAGEAHDYDPQVTGNF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0767 433 ProSiteProfiles CCT domain profile. 377 419 IPR010402 GO:0005515
Prci6g0767 433 Pfam CCT motif 377 419 IPR010402 GO:0005515
Prci6g0767 433 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci6g0767 433 CDD Bbox1_BBX-like 4 47 - -
Prci6g0767 433 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0767 Prci-Chr6 5121290 5124438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0767 1 427 C2C2-CO-like Transcription Factor Family AT3G21880 40.465 1.17e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Prci6g0767 CCT 7.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0767 - - qsa:O6P43_028700 511.916