Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0753 ATGAACGACCTGCTCTCTGATTCATTTGTTGGCGACAGTAAGGGCCAGCCTTCTCGACAAAGTGATATTGAGATGGGAACCCAGAACAACCATGATATGGGAATGGATGCTTTTAATAAGCAGATTGAGGAGGCTAATAAACAGGTTGATAAGCTATCTGGGCTACTAAAAAAACTAAAGGAAGCTAATGAGGAGTCCAAATCTGTTACAAAAGCTTCAGCCATGAAAGCTATCAAGAAGAGGATGGAAAAAGATATTGATGAAGTTGGAAAGATTGCACGTACAGTCAAAGCAAAAATAGAAGCTATAAACAAAGATAACCTAGCCAACAGACAAAAGCCTGGTTGCGAGAAGGGAACTGGAGTTGACAGAGCGAGGATGAACATGACAAGTTCCTTGACAAAAAGGTTTAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAGAGAAGAGTTATTACAGTCACAGGAACTAGACCAGATGATGAGACAATTGACCACCTGATAGAAACTGGAAGCAGCGAGCAAATCTTTCAGAAGGCTATGCTAGAAACAGGACGAGGACAGGTGTTAAATACAGTGGAAGAAATTCAGGAGCGACATGATACTGTGAAAGAAATTGAGAAAAGGCTTCTTGATTTACACCAGATTTACCTTGACATGGCAGTGTTAGTTGATGCTCAAGGAGAAATTTTAGATAACATTGAAAGTCAGGTCAACAATGCAGTCGATCATGTCCAGAGAGGGACATCTGTGCTACAAAATGCTAAGAAACTGCAGAAGAACTCTCGAAAATGGATGTGCATTGCCATCATTATACTATTGTTGATAGTAGCTATCATAGTTGTTGGTGTTATCCAACCTTGGAAGAGTAGCAAGGGCGCTTGA 921 0.4039 MNDLLSDSFVGDSKGQPSRQSDIEMGTQNNHDMGMDAFNKQIEEANKQVDKLSGLLKKLKEANEESKSVTKASAMKAIKKRMEKDIDEVGKIARTVKAKIEAINKDNLANRQKPGCEKGTGVDRARMNMTSSLTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGSSEQIFQKAMLETGRGQVLNTVEEIQERHDTVKEIEKRLLDLHQIYLDMAVLVDAQGEILDNIESQVNNAVDHVQRGTSVLQNAKKLQKNSRKWMCIAIIILLLIVAIIVVGVIQPWKSSKGA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0753 306 CDD SynN 35 192 IPR006011 GO:0016020
Prci6g0753 306 Gene3D - 198 298 - -
Prci6g0753 306 Pfam SNARE domain 241 293 IPR000727 -
Prci6g0753 306 SUPERFAMILY t-snare proteins 32 260 IPR010989 GO:0016020|GO:0016192
Prci6g0753 306 SMART tSNARE_6 200 267 IPR000727 -
Prci6g0753 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 205 267 IPR000727 -
Prci6g0753 306 Coils Coil 35 72 - -
Prci6g0753 306 CDD SNARE_syntaxin1-like 204 265 - -
Prci6g0753 306 Gene3D - 30 159 - -
Prci6g0753 306 SMART SynN_4 30 156 IPR006011 GO:0016020
Prci6g0753 306 FunFam Syntaxin 132 30 159 - -
Prci6g0753 306 Pfam Syntaxin 38 240 IPR006011 GO:0016020
Prci6g0753 306 MobiDBLite consensus disorder prediction 1 28 - -
Prci6g0753 306 PANTHER SYNTAXIN 34 285 IPR045242 -
Prci6g0753 306 FunFam Syntaxin 132 198 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0753 Prci-Chr6 5028662 5033018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0753 1 306 SNARE and Associated Proteins AT3G03800 60.323 6.68e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0753 K08486 - zju:107417045 501.13