Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0752 ATGAACGACCTGCTCTCTGATTCATTTGTTGGCGACAGTAAGGGCCAGCCTTCTCGACAAAGTGATATTGAGATGGGAACCCAGAACAACCATGATATGGGAATGGATGCTTTTAATAAGCAGATTGAGGAGGCTAATAAACAGGTTGATAAGCTATCTGGGCTACTAAAAAAACTAAAGGAAGCTAATGAGGAGTCCAAATCTGTTACAAAAGCTTCAGCCATGAAAGCTATCAAGAAGAGGATGGAAAAAGATATTGATGAAGTTGGAAAGATTGCACGTACAGTCAAAGCAAAAATAGAAGCTATAAACAAAGATAACCTAGCCAACAGACAAAAGCCTGGTTGCGAGAAGGGAACTGGAGTTGACAGAGCGAGGATGAACATGACAAGTTCCTTGACAAAAAGGTTTAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAGAGAAGAGTTATTACAGTCACAGGAACTAGACCAGATGATGAGACAATTGACCACCTGATAGAAACTGGAAGCAGCGAGCAAATCTTTCAGAAGGCTATGCTAGAAACAGGACGAGGACAGGTGTTAAATACAGTGGAAGAAATTCAGGAGCGACATGATACTGTGAAAGAAATTGAGAAAAGGCTTCTTGATTTACACCAGATTTACCTTGACATGGCAGTGTTAGTTGATGCTCAAGGAGAAATTTTAGATAACATTGAAAGTCAGGTGGCAAATGCAACTGATCATGTGAAATCGGGTACAGATGCTCTCCACACTGCAAAGACTTTGCAAAAAAGGTCAAGGAAGTGCATGATGATTTCCATTATTCTTCTCCTGGTCATCGCCGTTATTGTGGTACTCTCTATACTTAAACCATGGAAGAAGTAA 909 0.4026 MNDLLSDSFVGDSKGQPSRQSDIEMGTQNNHDMGMDAFNKQIEEANKQVDKLSGLLKKLKEANEESKSVTKASAMKAIKKRMEKDIDEVGKIARTVKAKIEAINKDNLANRQKPGCEKGTGVDRARMNMTSSLTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGSSEQIFQKAMLETGRGQVLNTVEEIQERHDTVKEIEKRLLDLHQIYLDMAVLVDAQGEILDNIESQVANATDHVKSGTDALHTAKTLQKRSRKCMMISIILLLVIAVIVVLSILKPWKK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0752 302 CDD SynN 35 192 IPR006011 GO:0016020
Prci6g0752 302 CDD SNARE_syntaxin1-like 204 264 - -
Prci6g0752 302 SUPERFAMILY t-snare proteins 32 260 IPR010989 GO:0016020|GO:0016192
Prci6g0752 302 Pfam SNARE domain 241 293 IPR000727 -
Prci6g0752 302 Pfam Syntaxin 38 240 IPR006011 GO:0016020
Prci6g0752 302 FunFam Syntaxin 132 30 159 - -
Prci6g0752 302 FunFam Syntaxin 132 198 298 - -
Prci6g0752 302 Coils Coil 35 72 - -
Prci6g0752 302 SMART SynN_4 30 156 IPR006011 GO:0016020
Prci6g0752 302 Gene3D - 198 298 - -
Prci6g0752 302 PANTHER SYNTAXIN 34 287 IPR045242 -
Prci6g0752 302 MobiDBLite consensus disorder prediction 1 28 - -
Prci6g0752 302 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 205 267 IPR000727 -
Prci6g0752 302 Gene3D - 30 159 - -
Prci6g0752 302 SMART tSNARE_6 200 267 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0752 Prci-Chr6 5028658 5034677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0752 1 300 SNARE and Associated Proteins AT3G03800 59.539 1.71e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0752 K08486 - zju:107417045 475.707