Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g0750 ATGCCGGCCGGGATTATGATTCCGGCGAGAAACATGCCCTCGATGATCGGAAGGAACAACAACGTTGGTGGTGGGTTTGGATCATCCTCGGGCCTTTCTCTCGGTCAGCAGCCAAACATGATGGAAGGTCAGCTCCACCCAGTACTGGACATGGCTCCCAACACATCGGAGAGCGACATCCCCCGAATCCGAGACGACGACTTCGACACCGCCACCAAGTCCGGAAGCGAAAACCAGGAAAATGGAGCCTCCGGCGACGACCAAGACCCTCGTCCCAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTCAAGGAGTGCCCTCACCCCGATGACAAGCAAAGGAAGGAGCTGAGTCGTGAATTAGGGTTGGAGCCACTGCAGGTCAAGTTCTGGTTTCAAAACAAGCGCACACAGATGAAGAACCAACATGAGCGGCATGAGAACTCACATCTCAGAGCCGAAAATGAAAAGCTTCGTGCAGATAACATGAGGTACAGAGAAGCTCTTAGCAATGCCTCCTGTCCTAACTGTGGTGGACCAACCGCTATAGGAGAAATGTCCTTCGACGAGCATCATTTGAGACTCGAAAATGCCCGCCTGAGAGAAGAGATTGATAGAATTTCAGCAATTGCTGCCAAGTACGTGGGGAAGCCAGTGGTGAACTATCCGCTACTTCCTCCATCTTCAGTTCCACCACGTCCCTTAGAGCTCGGAGTGGGTGGTAGTTATGGTGGACAGGCAGGGATTGGTGGTGGGGACATGTACGGAGGAGCCGGAGATCTTTTGAGGTCGATAAGTGGACTCACCGAAGCCGATAAGCCGATGATAATAGAGCTTGCCGTTGCGGCTATGGAAGAACTCGTGAGAATGGCTCAGATGGGTGAGCCCCTTTGGATGACAACCCTCGATGGCTCCACGACTGTGCTCAATGAAGACGAATACATGAGGTCCTTTCCTCGAGGAATTGGCCCTAAACCCGGTGGCTTGAAATGCGAAGCTTCACGAGAAACTGCACTCGTCATCATGAATCACATCAGCCTTGTCGAGATTCTCATGGATGTGAACCAATGGTCGACAGTGTTCTCTGGTATAGTCTCAAGAGCAATGACTATGGAAGTACTATCAACGGGGGTGGCTGGGAACTACAACGGTGCCTTGCAAGTGATGACAGCAGAGTTGCAAGTGCCTTCACCTCTAGTGCCAACTCGAGAGAGTTATTTCGTGAGGTATTGTAAGCAGCACGCTGACGGTACATGGGCAGTAGTGGACGTCTCTTTGGACCATCTTAGCACTGCTCCTGTCAAATGCAGAAGACGACCTTCTGGTTGCTTAATCCAAGAAATGCCCAACGGCTACTCTAAGGTGACGTGGATTGAACATGTAGAAGTGGATGATAGAGGTGTACATAGTCTATACAAGCAGCTTGTTAGTTCAGGCCACGCATTTGGCGCAAAACGATGGATCGCGACCTTAGATCGACAGTGCGAAAGGCTTGCTAGTGCCATGGCTTCCAACATTCCCACCGGTGACGTTGGAGTGATAACAAGCCCAGATGGGAGGAGGAGTATGTTGAAGCTGGCCGAGAGAATGGTGATAAGCTTCTGTGCTGGAGTTAGCGCTTCCACTGCTCACACGTGGACGACTCTCTCTGGAACCGCGGATGATGTACGGGTCATGACCCGAAAGAGCGTGGATGACCCGGGAAGACCTCCTGGTATTGTTCTCAGCGCTGCAACCTCTTTTTGGCTTCCTGTTCCTCCCAAGCGAGTTTTTGATTTCCTCCGCGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGTGGGGAGGTCCAAGAAATGGCACACATAGCTAACGGACGAGATACAGGCAACTGTGTGTCGCTACTTCGAGTGAATAGTGCAAATTCGAGCCAGAGCAACATGTTGATACTGCAAGAGAGCTGCACGGACTCAACGGGCTCTTTCGTCATATATGCTCCTGTAGATGTAGTGGCCATGAACGTAGTTCTGAATGGAGGGGATCCCGACTACGTGGCACTTCTTCCTTCTGGGTTTGCTATCCTTCCCGATGGTACCACAGCTCATGGAGGTGGCATTGGTGAAACAGGCCATGGTGGATCCCTCTTGACCGTTGCTTTTCAAATCTTGGTCGATTCCGTTCCCACCGCTAAGCTCTCACTCGGATCTGTTGCTACTGTCAATAACCTTATTGCCTGCACTGTTGAGAGAATTAAGGCTTCTTTATCTTGTGAAGCTGCCTGA 2295 0.5129 MPAGIMIPARNMPSMIGRNNNVGGGFGSSSGLSLGQQPNMMEGQLHPVLDMAPNTSESDIPRIRDDDFDTATKSGSENQENGASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSHLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLPPSSVPPRPLELGVGGSYGGQAGIGGGDMYGGAGDLLRSISGLTEADKPMIIELAVAAMEELVRMAQMGEPLWMTTLDGSTTVLNEDEYMRSFPRGIGPKPGGLKCEASRETALVIMNHISLVEILMDVNQWSTVFSGIVSRAMTMEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDHLSTAPVKCRRRPSGCLIQEMPNGYSKVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWIATLDRQCERLASAMASNIPTGDVGVITSPDGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGXDDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSEWDILSNGGEVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGTTAHGGGIGETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g0750 765 MobiDBLite consensus disorder prediction 1 106 - -
Prci6g0750 765 CDD START_ArGLABRA2_like 282 505 - -
Prci6g0750 765 ProSiteProfiles START domain profile. 278 509 IPR002913 GO:0008289
Prci6g0750 765 Pfam Homeodomain 94 150 IPR001356 GO:0003677
Prci6g0750 765 Pfam START domain 288 506 IPR002913 GO:0008289
Prci6g0750 765 SMART HOX_1 92 155 IPR001356 GO:0003677
Prci6g0750 765 MobiDBLite consensus disorder prediction 14 40 - -
Prci6g0750 765 SMART START_1 287 506 IPR002913 GO:0008289
Prci6g0750 765 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Prci6g0750 765 SUPERFAMILY Homeodomain-like 86 157 IPR009057 -
Prci6g0750 765 SUPERFAMILY Bet v1-like 279 508 - -
Prci6g0750 765 Gene3D - 356 503 IPR023393 -
Prci6g0750 765 SUPERFAMILY Bet v1-like 526 757 - -
Prci6g0750 765 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Prci6g0750 765 MobiDBLite consensus disorder prediction 59 73 - -
Prci6g0750 765 CDD homeodomain 94 152 IPR001356 GO:0003677
Prci6g0750 765 Gene3D - 79 168 - -
Prci6g0750 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 91 760 IPR042160 -
Prci6g0750 765 FunFam Homeobox-leucine zipper protein HDG1 79 167 - -
Prci6g0750 765 Coils Coil 145 177 - -
Prci6g0750 765 FunFam Homeobox-leucine zipper protein GLABRA 2 287 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g0750 Prci-Chr6 4987450 4992719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g0750 63 765 Homeobox Transcription Factor Family AT1G05230 80.932 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci6g0750 START 1.3e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g0750 K09338 - gmx:100797992 1304.27